FFCP PHASE1:Hg19::chr1:236046843..236046855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=16bp_to_ENST00000536965_5end | |association_with_transcript=16bp_to_ENST00000536965_5end | ||
|cluster_id=chr1:236046843..236046855,- | |||
|coexpression_cluster_id=C610 | |coexpression_cluster_id=C610 | ||
|description=CAGE_peak_8_at_LYST_5end | |description=CAGE_peak_8_at_LYST_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!7.67e-14!10;CL:0000541!7.67e-14!10;CL:0000990!1.74e-10!8;CL:0002567!1.07e-09!3;CL:0000147!1.64e-09!14;CL:0000451!1.98e-08!10;CL:0000710!5.22e-08!20 | |ontology_enrichment_celltype=CL:0000148!7.67e-14!10;CL:0000541!7.67e-14!10;CL:0000990!1.74e-10!8;CL:0002567!1.07e-09!3;CL:0000147!1.64e-09!14;CL:0000451!1.98e-08!10;CL:0000710!5.22e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.56e-74;10!CL:0000147;3.33e-53;14!CL:0002567;1.30e-46;3!CL:0000710;3.48e-37;20!CL:0000075;1.77e-27;27!CL:0002077;3.15e-19;34!CL:0002566;1.21e-16;1 | |ontology_enrichment_celltype_v019=CL:0000148;1.56e-74;10!CL:0000147;3.33e-53;14!CL:0002567;1.30e-46;3!CL:0000710;3.48e-37;20!CL:0000075;1.77e-27;27!CL:0002077;3.15e-19;34!CL:0002566;1.21e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.56e-74,10;CL:0000541,1.56e-74,10;CL:0000147,3.33e-53,14;CL:0002567,1.21e-46,3;CL:0000710,3.48e-37,20;CL:0000075,1.77e-27,27;CL:0002077,9.35e-22,34;CL:0000333,3.98e-17,41;CL:0002566,1.21e-16,1;CL:0000133,6.00e-12,59;CL:0000221,9.13e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.58e-07;59 | |ontology_enrichment_development_v019=CL:0000133;8.58e-07;59 | ||
|ontology_enrichment_disease=DOID:1909!5.18e-07!2 | |ontology_enrichment_disease=DOID:1909!5.18e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.00e-31;2!DOID:6193;1.93e-16;1!DOID:0060060;2.63e-16;1!DOID:0060061;2.63e-16;1!DOID:8691;2.63e-16;1!DOID:3350;6.94e-09;2 | |ontology_enrichment_disease_v019=DOID:1909;1.00e-31;2!DOID:6193;1.93e-16;1!DOID:0060060;2.63e-16;1!DOID:0060061;2.63e-16;1!DOID:8691;2.63e-16;1!DOID:3350;6.94e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.00e-31,2;DOID:6193,1.93e-16,1;DOID:0060060,2.63e-16,1;DOID:0060061,2.63e-16,1;DOID:8691,2.63e-16,1;DOID:3350,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!2.79e-12!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@LYST | |short_description=p8@LYST | ||
}} | }} |
Latest revision as of 13:25, 16 September 2015
Short description: | p8@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 16bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.56e-74 | 10 |
melanoblast | 1.56e-74 | 10 |
pigment cell | 3.33e-53 | 14 |
light melanocyte | 1.21e-46 | 3 |
neurecto-epithelial cell | 3.48e-37 | 20 |
columnar/cuboidal epithelial cell | 1.77e-27 | 27 |
ecto-epithelial cell | 9.35e-22 | 34 |
migratory neural crest cell | 3.98e-17 | 41 |
dark melanocyte | 1.21e-16 | 1 |
neurectodermal cell | 6.00e-12 | 59 |
ectodermal cell | 9.13e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.00e-31 | 2 |
epithelioid sarcoma | 1.93e-16 | 1 |
non-Hodgkin lymphoma | 2.63e-16 | 1 |
cutaneous T cell lymphoma | 2.63e-16 | 1 |
mycosis fungoides | 2.63e-16 | 1 |
mesenchymal cell neoplasm | 6.94e-09 | 2 |