FFCP PHASE1:Hg19::chr1:204400970..204400981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:204400970..204400981,- | |||
|description=CAGE_peak_at_chr1:204400970..204400981,- | |description=CAGE_peak_at_chr1:204400970..204400981,- | ||
|id=chr1:204400970..204400981,- | |id=chr1:204400970..204400981,- | ||
|ontology_enrichment_celltype=CL:0002541!3.82e-13!3;CL:0002150!1.18e-12!3;CL:0000861!1.18e-12!3;CL:0000077!1.41e-09!19;CL:0000575!3.51e-09!2;CL:0000066!5.43e-08!254 | |ontology_enrichment_celltype=CL:0002541!3.82e-13!3;CL:0002150!1.18e-12!3;CL:0000861!1.18e-12!3;CL:0000077!1.41e-09!19;CL:0000575!3.51e-09!2;CL:0000066!5.43e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.92e-25;3 | |ontology_enrichment_celltype_v019=CL:0002541;7.92e-25;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.01e-24,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.55e-30;29!UBERON:0003124;2.97e-19;1 | |ontology_enrichment_development_v019=UBERON:0008947;4.55e-30;29!UBERON:0003124;2.97e-19;1 | ||
|ontology_enrichment_disease=DOID:305!2.90e-08!106;DOID:0050687!1.71e-07!143 | |ontology_enrichment_disease=DOID:305!2.90e-08!106;DOID:0050687!1.71e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.27e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.43e-37!9;UBERON:0001557!9.36e-17!19;UBERON:0005631!1.26e-13!14;UBERON:0000158!1.26e-13!14;UBERON:0008947!2.36e-13!38;UBERON:0003258!2.36e-13!38;UBERON:0000476!3.82e-13!3;UBERON:0000920!3.82e-13!3;UBERON:0000072!1.42e-10!46;UBERON:0003124!7.74e-10!7;UBERON:0000065!7.75e-09!53;UBERON:0000064!7.33e-08!219;UBERON:0000478!1.60e-07!24 | |ontology_enrichment_uberon=UBERON:0001737!2.43e-37!9;UBERON:0001557!9.36e-17!19;UBERON:0005631!1.26e-13!14;UBERON:0000158!1.26e-13!14;UBERON:0008947!2.36e-13!38;UBERON:0003258!2.36e-13!38;UBERON:0000476!3.82e-13!3;UBERON:0000920!3.82e-13!3;UBERON:0000072!1.42e-10!46;UBERON:0003124!7.74e-10!7;UBERON:0000065!7.75e-09!53;UBERON:0000064!7.33e-08!219;UBERON:0000478!1.60e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.36e-97;9!UBERON:0001557;6.36e-97;9!UBERON:0003124;7.92e-25;3!UBERON:0000920;7.92e-25;3!UBERON:0000072;4.26e-22;37!UBERON:0000065;8.14e-20;44!UBERON:0001004;2.84e-11;65!UBERON:0005631;3.89e-08;10!UBERON:0000158;3.89e-08;10!UBERON:0000478;2.38e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.36e-97;9!UBERON:0001557;6.36e-97;9!UBERON:0003124;7.92e-25;3!UBERON:0000920;7.92e-25;3!UBERON:0000072;4.26e-22;37!UBERON:0000065;8.14e-20;44!UBERON:0001004;2.84e-11;65!UBERON:0005631;3.89e-08;10!UBERON:0000158;3.89e-08;10!UBERON:0000478;2.38e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.90e-97,9;UBERON:0001557,6.87e-46,19;UBERON:0000920,1.01e-24,3;UBERON:0003124,1.06e-23,7;UBERON:0008947,6.88e-23,38;UBERON:0003258,6.88e-23,38;UBERON:0000072,1.82e-18,47;UBERON:0000065,4.84e-16,54;UBERON:0005631,3.32e-12,14;UBERON:0000158,3.32e-12,14;UBERON:0001004,1.26e-11,74;UBERON:0001041,7.75e-10,87;UBERON:0000478,2.30e-07,24;UBERON:0004921,4.39e-07,118 | |||
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| ||
|short_description=p@chr1:204400970..204400981,- | |short_description=p@chr1:204400970..204400981,- | ||
}} | }} |
Latest revision as of 02:38, 28 July 2015
Short description: | p@chr1:204400970..204400981, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204400970..204400981, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.01e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.90e-97 | 9 |
upper respiratory tract | 6.87e-46 | 19 |
egg chorion | 1.01e-24 | 3 |
chorion | 1.06e-23 | 7 |
respiratory primordium | 6.88e-23 | 38 |
endoderm of foregut | 6.88e-23 | 38 |
segment of respiratory tract | 1.82e-18 | 47 |
respiratory tract | 4.84e-16 | 54 |
extraembryonic membrane | 3.32e-12 | 14 |
membranous layer | 3.32e-12 | 14 |
respiratory system | 1.26e-11 | 74 |
foregut | 7.75e-10 | 87 |
extraembryonic structure | 2.30e-07 | 24 |
subdivision of digestive tract | 4.39e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.27e-08 | 106 |