FFCP PHASE1:Hg19::chr11:72493920..72493932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10809 | |EntrezGene=10809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10666 | |HGNC=10666 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5A8 | |UniProt=F5H5A8 | ||
|association_with_transcript=-346bp_to_ENST00000536290_5end | |association_with_transcript=-346bp_to_ENST00000536290_5end | ||
|cluster_id=chr11:72493920..72493932,- | |||
|coexpression_cluster_id=C194 | |coexpression_cluster_id=C194 | ||
|description=CAGE_peak_19_at_STARD10_5end | |description=CAGE_peak_19_at_STARD10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;6.72e-26;1!CL:0002178;1.47e-09;3!CL:0002563;1.98e-07;4 | |ontology_enrichment_celltype_v019=CL:0002553;6.72e-26;1!CL:0002178;1.47e-09;3!CL:0002563;1.98e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.93e-26,1;CL:0002178,1.54e-09,3;CL:0002563,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!2.07e-20!4;DOID:1612!2.07e-20!4 | |ontology_enrichment_disease=DOID:5093!2.07e-20!4;DOID:1612!2.07e-20!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.15e-56;4!DOID:1612;2.15e-56;4!DOID:299;2.25e-16;25!DOID:3119;4.42e-08;14 | |ontology_enrichment_disease_v019=DOID:5093;2.15e-56;4!DOID:1612;2.15e-56;4!DOID:299;2.25e-16;25!DOID:3119;4.42e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.60e-56,4;DOID:1612,2.60e-56,4;DOID:299,2.38e-16,25;DOID:305,1.51e-08,106;DOID:3119,4.34e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.60e-19!115;UBERON:0001950!6.28e-16!20;UBERON:0001872!6.31e-15!5;UBERON:0000955!8.37e-15!69;UBERON:0006238!8.37e-15!69;UBERON:0002619!2.06e-14!22;UBERON:0001869!2.09e-14!32;UBERON:0001049!2.45e-14!57;UBERON:0005068!2.45e-14!57;UBERON:0006241!2.45e-14!57;UBERON:0007135!2.45e-14!57;UBERON:0002616!9.41e-14!59;UBERON:0001893!1.83e-13!34;UBERON:0003080!8.43e-13!42;UBERON:0000956!1.42e-12!25;UBERON:0000203!1.42e-12!25;UBERON:0000310!2.11e-12!10;UBERON:0001017!6.19e-12!82;UBERON:0002791!1.99e-11!33;UBERON:0001443!3.02e-11!11;UBERON:0005743!3.17e-11!86;UBERON:0002020!4.74e-11!34;UBERON:0003528!4.74e-11!34;UBERON:0002780!7.17e-11!41;UBERON:0001890!7.17e-11!41;UBERON:0006240!7.17e-11!41;UBERON:0000073!7.61e-10!94;UBERON:0001016!7.61e-10!94;UBERON:0003075!1.65e-08!86;UBERON:0007284!1.65e-08!86;UBERON:0003056!3.69e-08!61;UBERON:0002346!5.30e-08!90;UBERON:0000033!7.49e-08!123;UBERON:0000153!2.54e-07!129;UBERON:0007811!2.54e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!2.60e-19!115;UBERON:0001950!6.28e-16!20;UBERON:0001872!6.31e-15!5;UBERON:0000955!8.37e-15!69;UBERON:0006238!8.37e-15!69;UBERON:0002619!2.06e-14!22;UBERON:0001869!2.09e-14!32;UBERON:0001049!2.45e-14!57;UBERON:0005068!2.45e-14!57;UBERON:0006241!2.45e-14!57;UBERON:0007135!2.45e-14!57;UBERON:0002616!9.41e-14!59;UBERON:0001893!1.83e-13!34;UBERON:0003080!8.43e-13!42;UBERON:0000956!1.42e-12!25;UBERON:0000203!1.42e-12!25;UBERON:0000310!2.11e-12!10;UBERON:0001017!6.19e-12!82;UBERON:0002791!1.99e-11!33;UBERON:0001443!3.02e-11!11;UBERON:0005743!3.17e-11!86;UBERON:0002020!4.74e-11!34;UBERON:0003528!4.74e-11!34;UBERON:0002780!7.17e-11!41;UBERON:0001890!7.17e-11!41;UBERON:0006240!7.17e-11!41;UBERON:0000073!7.61e-10!94;UBERON:0001016!7.61e-10!94;UBERON:0003075!1.65e-08!86;UBERON:0007284!1.65e-08!86;UBERON:0003056!3.69e-08!61;UBERON:0002346!5.30e-08!90;UBERON:0000033!7.49e-08!123;UBERON:0000153!2.54e-07!129;UBERON:0007811!2.54e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.11e-40;10!UBERON:0001443;2.25e-36;11!UBERON:0000915;7.74e-11;52!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000310;6.11e-40;10!UBERON:0001443;2.25e-36;11!UBERON:0000915;7.74e-11;52!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,6.42e-40,10;UBERON:0001443,2.35e-36,11;UBERON:0000915,3.48e-12,52;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11183958163348,7.72637545885385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,6.2502662660456,0.262379999988587,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,2.3054466744657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.412079291905832,0.741438982396034,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,7.99539403814589,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.611207220914332,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11183958163348,7.72637545885385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,6.2502662660456,0.262379999988587,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,2.3054466744657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.412079291905832,0.741438982396034,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,7.99539403814589,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.611207220914332,0,0,0,0 | ||
|short_description=p19@STARD10 | |short_description=p19@STARD10 | ||
}} | }} |
Latest revision as of 01:53, 20 September 2015
Short description: | p19@STARD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_STARD10_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | -346bp_to_ENST00000536290_5end |
EntrezGene: | STARD10 |
HGNC: | 10666 |
UniProt: | F5H5A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.93e-26 | 1 |
epithelial cell of stomach | 1.54e-09 | 3 |
intestinal epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 6.42e-40 | 10 |
chest | 2.35e-36 | 11 |
thoracic segment of trunk | 3.48e-12 | 52 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.60e-56 | 4 |
breast cancer | 2.60e-56 | 4 |
adenocarcinoma | 2.38e-16 | 25 |
carcinoma | 1.51e-08 | 106 |
gastrointestinal system cancer | 4.34e-08 | 14 |