FFCP PHASE1:Hg19::chr12:78333998..78334003,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89795 | |EntrezGene=89795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |HGNC=15998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000549369_5end | |association_with_transcript=-43bp_to_ENST00000549369_5end | ||
|cluster_id=chr12:78333998..78334003,+ | |||
|coexpression_cluster_id=C181 | |coexpression_cluster_id=C181 | ||
|description=CAGE_peak_20_at_NAV3_5end | |description=CAGE_peak_20_at_NAV3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!4.96e-12!75;CL:0000055!1.57e-11!180;CL:0002552!3.74e-09!5;CL:0000548!1.78e-07!679;CL:0000004!1.78e-07!679;CL:0000255!1.78e-07!679;CL:0000012!2.54e-07!682 | |ontology_enrichment_celltype=CL:0000057!4.96e-12!75;CL:0000055!1.57e-11!180;CL:0002552!3.74e-09!5;CL:0000548!1.78e-07!679;CL:0000004!1.78e-07!679;CL:0000255!1.78e-07!679;CL:0000012!2.54e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000346;2.59e-12;3!CL:1000428;2.59e-12;3!CL:0002559;6.55e-08;5!CL:0002552;6.55e-08;5 | |ontology_enrichment_celltype_v019=CL:0000346;2.59e-12;3!CL:1000428;2.59e-12;3!CL:0002559;6.55e-08;5!CL:0002552;6.55e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.31e-12,3;CL:1000428,2.31e-12,3;CL:0002559,6.13e-08,5;CL:0002552,6.55e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;9.07e-18;2!DOID:1115;1.25e-07;20 | |ontology_enrichment_disease_v019=DOID:4468;9.07e-18;2!DOID:1115;1.25e-07;20 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:1115,1.33e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0002100!9.76e-10!216;UBERON:0000914!8.54e-09!83;UBERON:0002329!8.54e-09!83;UBERON:0003077!8.54e-09!83;UBERON:0003059!8.54e-09!83;UBERON:0007282!8.54e-09!83;UBERON:0009618!8.54e-09!83;UBERON:0007285!8.54e-09!83;UBERON:0001828!6.12e-08!8;UBERON:0005256!1.22e-07!143 | |ontology_enrichment_uberon=UBERON:0002100!9.76e-10!216;UBERON:0000914!8.54e-09!83;UBERON:0002329!8.54e-09!83;UBERON:0003077!8.54e-09!83;UBERON:0003059!8.54e-09!83;UBERON:0007282!8.54e-09!83;UBERON:0009618!8.54e-09!83;UBERON:0007285!8.54e-09!83;UBERON:0001828!6.12e-08!8;UBERON:0005256!1.22e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.59e-12;3!UBERON:0001992;2.59e-12;3!UBERON:0002073;6.55e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000412;2.59e-12;3!UBERON:0001992;2.59e-12;3!UBERON:0002073;6.55e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.31e-12,3;UBERON:0001992,2.31e-12,3;UBERON:0002073,6.13e-08,5;UBERON:0005086,6.13e-08,5 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.860509862246441,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0.485618833104395,0.280901613404497,0.61246251376468,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.554128230968366,0.438977620880838,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.276149695926898,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.788512075169673,0.585707074963566,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.528001682597033,0,0,0,0,0,0,0,0,0,0,5.11164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.310525913752519,0,0,1.04349012362347,0.300515217994437,0,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,1.01365464391844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.860509862246441,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0.485618833104395,0.280901613404497,0.61246251376468,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.554128230968366,0.438977620880838,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.276149695926898,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.788512075169673,0.585707074963566,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.528001682597033,0,0,0,0,0,0,0,0,0,0,5.11164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.310525913752519,0,0,1.04349012362347,0.300515217994437,0,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,1.01365464391844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p20@NAV3 | |short_description=p20@NAV3 | ||
}} | }} |
Latest revision as of 22:32, 24 September 2015
Short description: | p20@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NAV3_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | -43bp_to_ENST00000549369_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.31e-12 | 3 |
stem cell of epidermis | 2.31e-12 | 3 |
hair follicle cell | 6.13e-08 | 5 |
fibroblast of gingiva | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.31e-12 | 3 |
papillary layer of dermis | 2.31e-12 | 3 |
hair follicle | 6.13e-08 | 5 |
hair follicle placode | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.48e-18 | 2 |
sarcoma | 1.33e-07 | 20 |