FFCP PHASE1:Hg19::chr7:116502545..116502558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=830 | |EntrezGene=830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1490 | |HGNC=1490 | ||
|TSSclassifier=strong | |||
|UniProt=A4D0V4,P47755 | |UniProt=A4D0V4,P47755 | ||
|association_with_transcript=-4bp_to_NM_006136,uc003vil.2,uc011knk.1_5end | |association_with_transcript=-4bp_to_NM_006136,uc003vil.2,uc011knk.1_5end | ||
|cluster_id=chr7:116502545..116502558,+ | |||
|description=CAGE_peak_3_at_CAPZA2_5end | |description=CAGE_peak_3_at_CAPZA2_5end | ||
|id=chr7:116502545..116502558,+ | |id=chr7:116502545..116502558,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.76e-11!180;CL:0000057!2.51e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.76e-11!180;CL:0000057!2.51e-07!75 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.36e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.46e-10!83;UBERON:0002329!2.46e-10!83;UBERON:0003077!2.46e-10!83;UBERON:0003059!2.46e-10!83;UBERON:0007282!2.46e-10!83;UBERON:0009618!2.46e-10!83;UBERON:0007285!2.46e-10!83;UBERON:0002204!2.97e-08!167;UBERON:0000486!7.16e-08!82;UBERON:0004290!1.17e-07!70;UBERON:0000468!1.60e-07!659;UBERON:0001134!4.66e-07!61;UBERON:0002036!4.66e-07!61;UBERON:0003082!4.66e-07!61;UBERON:0002385!5.88e-07!63;UBERON:0001015!5.88e-07!63;UBERON:0000383!5.88e-07!63 | |ontology_enrichment_uberon=UBERON:0000914!2.46e-10!83;UBERON:0002329!2.46e-10!83;UBERON:0003077!2.46e-10!83;UBERON:0003059!2.46e-10!83;UBERON:0007282!2.46e-10!83;UBERON:0009618!2.46e-10!83;UBERON:0007285!2.46e-10!83;UBERON:0002204!2.97e-08!167;UBERON:0000486!7.16e-08!82;UBERON:0004290!1.17e-07!70;UBERON:0000468!1.60e-07!659;UBERON:0001134!4.66e-07!61;UBERON:0002036!4.66e-07!61;UBERON:0003082!4.66e-07!61;UBERON:0002385!5.88e-07!63;UBERON:0001015!5.88e-07!63;UBERON:0000383!5.88e-07!63 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.35e-10,167;UBERON:0000926,8.38e-09,315;UBERON:0004120,8.38e-09,315;UBERON:0006603,8.38e-09,315;UBERON:0000486,2.26e-08,83;UBERON:0002329,4.54e-08,71;UBERON:0003059,4.54e-08,71;UBERON:0007282,4.54e-08,71;UBERON:0004290,4.54e-08,71;UBERON:0009618,4.54e-08,71;UBERON:0003077,5.10e-08,72;UBERON:0007285,5.10e-08,72;UBERON:0007524,5.49e-08,73;UBERON:0001134,1.81e-07,62;UBERON:0002036,1.81e-07,62;UBERON:0003082,1.81e-07,62;UBERON:0002385,2.32e-07,64;UBERON:0001015,2.32e-07,64;UBERON:0000383,2.32e-07,64 | |||
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| ||
|short_description=p3@CAPZA2 | |short_description=p3@CAPZA2 | ||
}} | }} |
Latest revision as of 18:49, 15 September 2015
Short description: | p3@CAPZA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPZA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_NM_006136, uc003vil.2, uc011knk.1_5end |
EntrezGene: | CAPZA2 |
HGNC: | 1490 |
UniProt: | A4D0V4P47755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.36e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.35e-10 | 167 |
mesoderm | 8.38e-09 | 315 |
mesoderm-derived structure | 8.38e-09 | 315 |
presumptive mesoderm | 8.38e-09 | 315 |
multilaminar epithelium | 2.26e-08 | 83 |
somite | 4.54e-08 | 71 |
presomitic mesoderm | 4.54e-08 | 71 |
presumptive segmental plate | 4.54e-08 | 71 |
dermomyotome | 4.54e-08 | 71 |
trunk paraxial mesoderm | 4.54e-08 | 71 |
paraxial mesoderm | 5.10e-08 | 72 |
presumptive paraxial mesoderm | 5.10e-08 | 72 |
dense mesenchyme tissue | 5.49e-08 | 73 |
skeletal muscle tissue | 1.81e-07 | 62 |
striated muscle tissue | 1.81e-07 | 62 |
myotome | 1.81e-07 | 62 |
muscle tissue | 2.32e-07 | 64 |
musculature | 2.32e-07 | 64 |
musculature of body | 2.32e-07 | 64 |