FFCP PHASE1:Hg19::chr19:5336498..5336527,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:5336498..5336527,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_at_chr19:5336498..5336527,+ | |description=CAGE_peak_at_chr19:5336498..5336527,+ | ||
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|ontology_enrichment_celltype=CL:0000784!3.87e-13!3;CL:0000767!1.11e-12!3;CL:0000842!1.24e-12!3;CL:0000224!1.42e-09!4 | |ontology_enrichment_celltype=CL:0000784!3.87e-13!3;CL:0000767!1.11e-12!3;CL:0000842!1.24e-12!3;CL:0000224!1.42e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.03e-35;3!CL:0000767;1.06e-33;3!CL:0000226;7.00e-16;3!CL:0000842;7.00e-16;3!CL:0000094;4.65e-13;8!CL:0000451;5.81e-10;10!CL:0000081;1.19e-09;11 | |ontology_enrichment_celltype_v019=CL:0000784;7.03e-35;3!CL:0000767;1.06e-33;3!CL:0000226;7.00e-16;3!CL:0000842;7.00e-16;3!CL:0000094;4.65e-13;8!CL:0000451;5.81e-10;10!CL:0000081;1.19e-09;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.04e-35,3;CL:0000767,1.48e-33,3;CL:0000226,5.80e-16,3;CL:0000842,5.80e-16,3;CL:0000094,5.26e-13,8;CL:0000451,5.81e-10,10;CL:0000081,1.30e-09,11 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.60e-24!15;UBERON:0000179!2.60e-24!15;UBERON:0000463!2.60e-24!15;UBERON:0002390!5.08e-11!102;UBERON:0003061!5.08e-11!102;UBERON:0002193!8.58e-11!112;UBERON:0004177!1.38e-08!7;UBERON:0007023!4.16e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!2.60e-24!15;UBERON:0000179!2.60e-24!15;UBERON:0000463!2.60e-24!15;UBERON:0002390!5.08e-11!102;UBERON:0003061!5.08e-11!102;UBERON:0002193!8.58e-11!112;UBERON:0004177!1.38e-08!7;UBERON:0007023!4.16e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.41e-26;15!UBERON:0000179;4.41e-26;15!UBERON:0000463;4.41e-26;15!UBERON:0002372;1.96e-12;1!UBERON:0002171;1.96e-12;1!UBERON:0001961;1.96e-12;1!UBERON:0001744;1.96e-12;1!UBERON:0006518;1.96e-12;1!UBERON:0008949;1.96e-12;1!UBERON:0000101;1.96e-12;1!UBERON:0001042;1.96e-12;1!UBERON:0002167;1.96e-12;1!UBERON:0001735;1.96e-12;1!UBERON:0002390;9.08e-12;32!UBERON:0002193;3.69e-11;42!UBERON:0006562;7.61e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.41e-26;15!UBERON:0000179;4.41e-26;15!UBERON:0000463;4.41e-26;15!UBERON:0002372;1.96e-12;1!UBERON:0002171;1.96e-12;1!UBERON:0001961;1.96e-12;1!UBERON:0001744;1.96e-12;1!UBERON:0006518;1.96e-12;1!UBERON:0008949;1.96e-12;1!UBERON:0000101;1.96e-12;1!UBERON:0001042;1.96e-12;1!UBERON:0002167;1.96e-12;1!UBERON:0001735;1.96e-12;1!UBERON:0002390;9.08e-12;32!UBERON:0002193;3.69e-11;42!UBERON:0006562;7.61e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.86e-26,15;UBERON:0000179,3.86e-26,15;UBERON:0000463,3.86e-26,15;UBERON:0002171,1.40e-12,1;UBERON:0006518,1.40e-12,1;UBERON:0008949,1.40e-12,1;UBERON:0000101,1.40e-12,1;UBERON:0002167,1.40e-12,1;UBERON:0002372,2.75e-12,1;UBERON:0001961,2.75e-12,1;UBERON:0001744,2.75e-12,1;UBERON:0001735,2.75e-12,1 | |||
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| ||
|short_description=p@chr19:5336498..5336527,+ | |short_description=p@chr19:5336498..5336527,+ | ||
}} | }} |
Latest revision as of 16:55, 27 July 2015
Short description: | p@chr19:5336498..5336527, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5336498..5336527, + |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.04e-35 | 3 |
basophil | 1.48e-33 | 3 |
single nucleate cell | 5.80e-16 | 3 |
mononuclear cell | 5.80e-16 | 3 |
granulocyte | 5.26e-13 | 8 |
dendritic cell | 5.81e-10 | 10 |
blood cell | 1.30e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 3.86e-26 | 15 |
haemolymphatic fluid | 3.86e-26 | 15 |
organism substance | 3.86e-26 | 15 |
lower lobe of right lung | 1.40e-12 | 1 |
right lung lobe | 1.40e-12 | 1 |
lower lobe of lung | 1.40e-12 | 1 |
lobe of lung | 1.40e-12 | 1 |
right lung | 1.40e-12 | 1 |
tonsil | 2.75e-12 | 1 |
mucosa-associated lymphoid tissue | 2.75e-12 | 1 |
lymphoid tissue | 2.75e-12 | 1 |
tonsillar ring | 2.75e-12 | 1 |