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FFCP PHASE1:Hg19::chr1:247587582..247587593,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=114548
|EntrezGene=114548
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=16400
|HGNC=16400
|TSSclassifier=strong
|UniProt=Q96P20
|UniProt=Q96P20
|association_with_transcript=-327bp_to_AF054176_5end
|association_with_transcript=-327bp_to_AF054176_5end
|cluster_id=chr1:247587582..247587593,+
|coexpression_cluster_id=C0
|coexpression_cluster_id=C0
|description=CAGE_peak_6_at_NLRP3_5end
|description=CAGE_peak_6_at_NLRP3_5end
Line 9: Line 14:
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|ontology_enrichment_celltype=CL:0002057!4.42e-88!42;CL:0000860!7.84e-82!45;CL:0002194!7.74e-65!63;CL:0000576!7.74e-65!63;CL:0000040!7.74e-65!63;CL:0000559!7.74e-65!63;CL:0002009!1.08e-62!65;CL:0000839!7.40e-58!70;CL:0000557!5.70e-57!71;CL:0000766!9.78e-57!76;CL:0002087!2.38e-39!119;CL:0000763!1.04e-36!112;CL:0000049!1.04e-36!112;CL:0002031!5.12e-35!124;CL:0000738!7.60e-35!140;CL:0000037!3.54e-29!172;CL:0000566!3.54e-29!172;CL:0000988!3.18e-27!182;CL:0002032!1.10e-26!165;CL:0000837!1.10e-26!165;CL:0000134!1.37e-10!358;CL:0002320!2.95e-10!365;CL:0000219!4.40e-09!390;CL:0000048!1.79e-08!430;CL:0000723!2.92e-08!436;CL:0000034!5.49e-08!444;CL:0002619!7.20e-08!3
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-65;33!CL:0002057;1.72e-65;33!CL:0000473;5.98e-47;39!CL:0000234;5.98e-47;39!CL:0000576;5.10e-36;48!CL:0000766;8.92e-23;69!CL:0002087;2.26e-14;104!CL:0000763;5.34e-12;100!CL:0002393;3.71e-09;6!CL:0002397;3.71e-09;6
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-65;33!CL:0002057;1.72e-65;33!CL:0000473;5.98e-47;39!CL:0000234;5.98e-47;39!CL:0000576;5.10e-36;48!CL:0000766;8.92e-23;69!CL:0002087;2.26e-14;104!CL:0000763;5.34e-12;100!CL:0002393;3.71e-09;6!CL:0002397;3.71e-09;6
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-73,42;CL:0002057,1.23e-73,42;CL:0000473,2.94e-64,48;CL:0000234,2.94e-64,48;CL:0002194,4.05e-51,59;CL:0000576,4.05e-51,59;CL:0000040,4.05e-51,59;CL:0000559,4.05e-51,59;CL:0002009,2.01e-49,61;CL:0000839,1.26e-45,66;CL:0000557,6.23e-45,67;CL:0000766,9.44e-42,72;CL:0000763,1.91e-27,108;CL:0000049,1.91e-27,108;CL:0002087,1.09e-25,115;CL:0002031,1.46e-24,120;CL:0000738,1.69e-21,136;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361
|ontology_enrichment_development_v019=CL:0002057;9.86e-49;42
|ontology_enrichment_development_v019=CL:0002057;9.86e-49;42
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!1.04e-53!80;UBERON:0001474!1.38e-49!86;UBERON:0002390!4.59e-47!102;UBERON:0003061!4.59e-47!102;UBERON:0002193!2.44e-42!112;UBERON:0004765!2.16e-41!101;UBERON:0001434!2.16e-41!101;UBERON:0002405!1.18e-35!115;UBERON:0002204!1.50e-24!167;UBERON:0003081!4.55e-22!216;UBERON:0002384!8.39e-10!375;UBERON:0000926!3.70e-07!448;UBERON:0004120!3.70e-07!448;UBERON:0006603!3.70e-07!448
|ontology_enrichment_uberon=UBERON:0002371!1.04e-53!80;UBERON:0001474!1.38e-49!86;UBERON:0002390!4.59e-47!102;UBERON:0003061!4.59e-47!102;UBERON:0002193!2.44e-42!112;UBERON:0004765!2.16e-41!101;UBERON:0001434!2.16e-41!101;UBERON:0002405!1.18e-35!115;UBERON:0002204!1.50e-24!167;UBERON:0003081!4.55e-22!216;UBERON:0002384!8.39e-10!375;UBERON:0000926!3.70e-07!448;UBERON:0004120!3.70e-07!448;UBERON:0006603!3.70e-07!448
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-39,76;UBERON:0001474,1.55e-36,82;UBERON:0004765,3.45e-33,90;UBERON:0002405,4.44e-32,93;UBERON:0002390,2.23e-30,98;UBERON:0003061,2.23e-30,98;UBERON:0001434,9.56e-30,100;UBERON:0002193,1.91e-27,108;UBERON:0002204,3.24e-17,167;UBERON:0003081,7.27e-14,203;UBERON:0000926,2.79e-08,315;UBERON:0004120,2.79e-08,315;UBERON:0006603,2.79e-08,315;UBERON:0002384,9.92e-07,371
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|short_description=p6@NLRP3
|short_description=p6@NLRP3
}}
}}

Latest revision as of 23:59, 16 September 2015

Short description:p6@NLRP3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_NLRP3_5end
Coexpression cluster:C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral
Association with transcript: -327bp_to_AF054176_5end
EntrezGene:NLRP3
HGNC: 16400
UniProt: Q96P20
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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