FFCP PHASE1:Hg19::chr11:117695415..117695426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4026 | |HGNC=4026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000533281_5end | |association_with_transcript=28bp_to_ENST00000533281_5end | ||
|cluster_id=chr11:117695415..117695426,- | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_3_at_FXYD2_5end | |description=CAGE_peak_3_at_FXYD2_5end | ||
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|ontology_enrichment_celltype=CL:1000497!7.25e-39!18;CL:0002518!7.25e-39!18;CL:1000507!9.48e-37!12;CL:1000494!9.48e-37!12;CL:1000449!3.48e-32!16;CL:0002681!2.05e-22!13;CL:0002584!2.05e-22!13;CL:0000239!9.07e-13!3;CL:1000615!9.07e-13!3;CL:0002306!9.07e-13!3;CL:0000650!9.68e-12!3;CL:1000618!9.68e-12!3;CL:1001318!9.68e-12!3;CL:0002173!9.68e-12!3;CL:1000500!9.68e-12!3;CL:1000612!9.72e-09!7;CL:1000746!9.72e-09!7;CL:0000669!3.24e-07!5 | |ontology_enrichment_celltype=CL:1000497!7.25e-39!18;CL:0002518!7.25e-39!18;CL:1000507!9.48e-37!12;CL:1000494!9.48e-37!12;CL:1000449!3.48e-32!16;CL:0002681!2.05e-22!13;CL:0002584!2.05e-22!13;CL:0000239!9.07e-13!3;CL:1000615!9.07e-13!3;CL:0002306!9.07e-13!3;CL:0000650!9.68e-12!3;CL:1000618!9.68e-12!3;CL:1001318!9.68e-12!3;CL:0002173!9.68e-12!3;CL:1000500!9.68e-12!3;CL:1000612!9.72e-09!7;CL:1000746!9.72e-09!7;CL:0000669!3.24e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000497;9.51e-43;17!CL:0002518;9.51e-43;17!CL:1000507;1.34e-36;10!CL:1000494;1.34e-36;10!CL:1000449;2.60e-31;15!CL:0000239;7.31e-24;3!CL:1000615;7.31e-24;3!CL:0002306;7.31e-24;3!CL:0002681;2.50e-22;12!CL:0002584;2.50e-22;12!CL:0002581;5.11e-09;1!CL:0002616;8.49e-09;1 | |ontology_enrichment_celltype_v019=CL:1000497;9.51e-43;17!CL:0002518;9.51e-43;17!CL:1000507;1.34e-36;10!CL:1000494;1.34e-36;10!CL:1000449;2.60e-31;15!CL:0000239;7.31e-24;3!CL:1000615;7.31e-24;3!CL:0002306;7.31e-24;3!CL:0002681;2.50e-22;12!CL:0002584;2.50e-22;12!CL:0002581;5.11e-09;1!CL:0002616;8.49e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.11e-42,17;CL:0002518,1.11e-42,17;CL:1000507,1.71e-36,10;CL:1000494,1.71e-36,10;CL:1000449,2.99e-31,15;CL:0000239,7.91e-24,3;CL:1000615,7.91e-24,3;CL:0002306,7.91e-24,3;CL:0002681,2.75e-22,12;CL:0002584,2.75e-22,12;CL:0002581,4.54e-09,1;CL:0002616,7.85e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.11e-12;10!UBERON:0007687;1.11e-12;10!UBERON:0006242;2.04e-09;1!UBERON:0003104;1.13e-08;31 | |ontology_enrichment_development_v019=UBERON:0003918;1.11e-12;10!UBERON:0007687;1.11e-12;10!UBERON:0006242;2.04e-09;1!UBERON:0003104;1.13e-08;31 | ||
|ontology_enrichment_disease=DOID:4468!5.86e-09!2 | |ontology_enrichment_disease=DOID:4468!5.86e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@FXYD2 | |short_description=p3@FXYD2 | ||
}} | }} |
Latest revision as of 22:08, 15 September 2015
Short description: | p3@FXYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FXYD2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 28bp_to_ENST00000533281_5end |
EntrezGene: | FXYD2 |
HGNC: | 4026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.11e-42 | 17 |
kidney epithelial cell | 1.11e-42 | 17 |
kidney tubule cell | 1.71e-36 | 10 |
nephron tubule epithelial cell | 1.71e-36 | 10 |
epithelial cell of nephron | 2.99e-31 | 15 |
brush border epithelial cell | 7.91e-24 | 3 |
kidney cortex tubule cell | 7.91e-24 | 3 |
epithelial cell of proximal tubule | 7.91e-24 | 3 |
kidney cortical cell | 2.75e-22 | 12 |
renal cortical epithelial cell | 2.75e-22 | 12 |
perirenal preadipocyte | 4.54e-09 | 1 |
perirenal adipocyte cell | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.21e-40 | 26 |
kidney mesenchyme | 4.21e-40 | 26 |
upper urinary tract | 4.21e-40 | 26 |
kidney rudiment | 4.21e-40 | 26 |
kidney field | 4.21e-40 | 26 |
nephron tubule epithelium | 1.71e-36 | 10 |
cavitated compound organ | 2.61e-33 | 31 |
nephron epithelium | 2.99e-31 | 15 |
renal tubule | 2.99e-31 | 15 |
nephron tubule | 2.99e-31 | 15 |
nephron | 2.99e-31 | 15 |
uriniferous tubule | 2.99e-31 | 15 |
nephrogenic mesenchyme | 2.99e-31 | 15 |
excretory tube | 3.08e-29 | 16 |
kidney epithelium | 3.08e-29 | 16 |
abdomen element | 2.76e-25 | 54 |
abdominal segment element | 2.76e-25 | 54 |
renal cortex tubule | 7.91e-24 | 3 |
region of nephron tubule | 7.91e-24 | 3 |
proximal tubule | 7.91e-24 | 3 |
abdominal segment of trunk | 1.66e-22 | 60 |
abdomen | 1.66e-22 | 60 |
cortex of kidney | 2.75e-22 | 12 |
renal parenchyma | 2.75e-22 | 12 |
urinary system structure | 2.84e-21 | 47 |
renal system | 8.70e-21 | 48 |
cortex | 9.47e-18 | 15 |
parenchyma | 9.47e-18 | 15 |
trunk region element | 1.35e-16 | 101 |
perirenal fat | 3.49e-16 | 2 |
compound organ | 4.63e-14 | 68 |
subdivision of trunk | 1.05e-12 | 112 |
trunk | 5.73e-07 | 199 |
mesenchyme | 7.41e-07 | 160 |
entire embryonic mesenchyme | 7.41e-07 | 160 |