FFCP PHASE1:Hg19::chr11:2160036..2160049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_BC017277_5end | |association_with_transcript=21bp_to_BC017277_5end | ||
|cluster_id=chr11:2160036..2160049,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_7_at_BC017277_5end | |description=CAGE_peak_7_at_BC017277_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.73e-25;19!CL:0002575;1.18e-09;2!CL:0002536;1.81e-09;2!CL:0002549;7.10e-09;2!CL:0002537;1.69e-08;5!CL:0002541;5.85e-07;3!CL:0002577;9.36e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;2.73e-25;19!CL:0002575;1.18e-09;2!CL:0002536;1.81e-09;2!CL:0002549;7.10e-09;2!CL:0002537;1.69e-08;5!CL:0002541;5.85e-07;3!CL:0002577;9.36e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-25,19;CL:0002575,1.18e-09,2;CL:0002536,1.81e-09,2;CL:0002549,8.36e-09,2;CL:0002537,1.71e-08,5;CL:0002541,5.77e-07,3;CL:0002577,9.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.27e-09;11!UBERON:0009497;4.33e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.27e-09;11!UBERON:0009497;4.33e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.74e-16!14;UBERON:0000158!5.74e-16!14;UBERON:0000478!1.89e-14!24;UBERON:0003124!9.29e-12!7;UBERON:0001987!2.49e-07!4;UBERON:0004340!2.49e-07!4;UBERON:0004923!3.95e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!5.74e-16!14;UBERON:0000158!5.74e-16!14;UBERON:0000478!1.89e-14!24;UBERON:0003124!9.29e-12!7;UBERON:0001987!2.49e-07!4;UBERON:0004340!2.49e-07!4;UBERON:0004923!3.95e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.50e-27;24!UBERON:0005631;1.21e-20;10!UBERON:0000158;1.21e-20;10!UBERON:0000305;2.33e-15;7!UBERON:0001987;2.12e-10;4!UBERON:0005629;7.10e-09;2!UBERON:0005358;7.10e-09;2!UBERON:0001886;7.10e-09;2!UBERON:0004086;7.10e-09;2!UBERON:0005282;7.10e-09;2!UBERON:0005281;7.10e-09;2!UBERON:0000922;7.48e-09;49!UBERON:0003124;5.85e-07;3!UBERON:0000920;5.85e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.50e-27;24!UBERON:0005631;1.21e-20;10!UBERON:0000158;1.21e-20;10!UBERON:0000305;2.33e-15;7!UBERON:0001987;2.12e-10;4!UBERON:0005629;7.10e-09;2!UBERON:0005358;7.10e-09;2!UBERON:0001886;7.10e-09;2!UBERON:0004086;7.10e-09;2!UBERON:0005282;7.10e-09;2!UBERON:0005281;7.10e-09;2!UBERON:0000922;7.48e-09;49!UBERON:0003124;5.85e-07;3!UBERON:0000920;5.85e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.48e-29,14;UBERON:0000158,2.48e-29,14;UBERON:0000478,1.41e-27,24;UBERON:0003124,1.23e-15,7;UBERON:0000305,2.36e-15,7;UBERON:0004871,2.14e-13,8;UBERON:0001987,2.22e-10,4;UBERON:0004340,2.22e-10,4;UBERON:0005629,8.36e-09,2;UBERON:0005358,8.36e-09,2;UBERON:0001886,8.36e-09,2;UBERON:0004086,8.36e-09,2;UBERON:0005282,8.36e-09,2;UBERON:0005281,8.36e-09,2;UBERON:0000920,5.77e-07,3 | |||
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| ||
|short_description=p7@BC017277 | |short_description=p7@BC017277 | ||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p7@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 21bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.51e-25 | 19 |
central nervous system pericyte | 1.18e-09 | 2 |
amniotic epithelial cell | 1.81e-09 | 2 |
fibroblast of choroid plexus | 8.36e-09 | 2 |
amnion mesenchymal stem cell | 1.71e-08 | 5 |
chorionic membrane mesenchymal stem cell | 5.77e-07 | 3 |
placental epithelial cell | 9.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.48e-29 | 14 |
membranous layer | 2.48e-29 | 14 |
extraembryonic structure | 1.41e-27 | 24 |
chorion | 1.23e-15 | 7 |
amnion | 2.36e-15 | 7 |
somatic layer of lateral plate mesoderm | 2.14e-13 | 8 |
placenta | 2.22e-10 | 4 |
allantois | 2.22e-10 | 4 |
vascular plexus | 8.36e-09 | 2 |
ventricle of nervous system | 8.36e-09 | 2 |
choroid plexus | 8.36e-09 | 2 |
brain ventricle | 8.36e-09 | 2 |
ventricular system of brain | 8.36e-09 | 2 |
ventricular system of central nervous system | 8.36e-09 | 2 |
egg chorion | 5.77e-07 | 3 |