FFCP PHASE1:Hg19::chr16:67231743..67231789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:67231743..67231789,+ | |||
|description=CAGE_peak_at_chr16:67231743..67231789,+ | |description=CAGE_peak_at_chr16:67231743..67231789,+ | ||
|id=chr16:67231743..67231789,+ | |id=chr16:67231743..67231789,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.79e-20;7!CL:0000586;6.79e-20;7!CL:0000083;1.22e-09;4!CL:0002188;6.78e-08;5 | |ontology_enrichment_celltype_v019=CL:0000039;6.79e-20;7!CL:0000586;6.79e-20;7!CL:0000083;1.22e-09;4!CL:0002188;6.78e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.89e-20,7;CL:0000586,5.89e-20,7;CL:0000083,1.22e-09,4;CL:0002188,7.01e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4 | |ontology_enrichment_development_v019=UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.58e-34;1!DOID:10165;2.58e-34;1!DOID:1798;2.58e-34;1!DOID:1793;1.22e-09;4!DOID:3095;5.17e-07;22!DOID:2994;5.17e-07;22!DOID:170;7.58e-07;6 | |ontology_enrichment_disease_v019=DOID:1799;2.58e-34;1!DOID:10165;2.58e-34;1!DOID:1798;2.58e-34;1!DOID:1793;1.22e-09;4!DOID:3095;5.17e-07;22!DOID:2994;5.17e-07;22!DOID:170;7.58e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,2.58e-34,1;DOID:10165,2.58e-34,1;DOID:1798,2.58e-34,1;DOID:1793,1.22e-09,4;DOID:3095,4.94e-07,22;DOID:2994,4.94e-07,22;DOID:170,7.58e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.97e-34;1!UBERON:0005208;5.97e-34;1!UBERON:0004145;5.97e-34;1!UBERON:0005946;5.97e-34;1!UBERON:0005965;5.97e-34;1!UBERON:0002078;5.97e-34;1!UBERON:0002081;9.86e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0004151;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0002108;6.78e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002134;5.97e-34;1!UBERON:0005208;5.97e-34;1!UBERON:0004145;5.97e-34;1!UBERON:0005946;5.97e-34;1!UBERON:0005965;5.97e-34;1!UBERON:0002078;5.97e-34;1!UBERON:0002081;9.86e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0004151;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0002108;6.78e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,5.05e-34,1;UBERON:0005208,5.05e-34,1;UBERON:0005946,5.05e-34,1;UBERON:0005965,5.05e-34,1;UBERON:0002078,5.05e-34,1;UBERON:0002081,9.07e-18,2;UBERON:0002133,9.07e-18,2;UBERON:0010227,9.07e-18,2;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0004151,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0004145,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0002114,3.24e-12,2;UBERON:0002108,7.49e-08,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.657779629937804,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,3.41079048757134,1.52106320690811,0,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0.171986032471617,0,0,0.164230914106418,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0.223171457441873,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0.157611414598396,0.209818352539992,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,2.88097363929565,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0.219881033490858,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0.315543124386369,0,0,1.0580536810308,0.371995018166751,0,0,0,0.437062287854782,0,0,0.26721740526556,0,0,0.227336094654718,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| ||
|short_description=p@chr16:67231743..67231789,+ | |short_description=p@chr16:67231743..67231789,+ | ||
}} | }} |
Latest revision as of 10:14, 17 September 2015
Short description: | p@chr16:67231743..67231789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67231743..67231789, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.89e-20 | 7 |
germ cell | 5.89e-20 | 7 |
epithelial cell of pancreas | 1.22e-09 | 4 |
glomerular endothelial cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 5.05e-34 | 1 |
right atrium valve | 5.05e-34 | 1 |
outflow tract of atrium | 5.05e-34 | 1 |
outflow part of right atrium | 5.05e-34 | 1 |
right cardiac atrium | 5.05e-34 | 1 |
cardiac atrium | 9.07e-18 | 2 |
atrioventricular valve | 9.07e-18 | 2 |
future cardiac atrium | 9.07e-18 | 2 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardiac chamber | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
outflow tract | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
duodenum | 3.24e-12 | 2 |
small intestine | 7.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.58e-34 | 1 |
endocrine pancreas cancer | 2.58e-34 | 1 |
pancreatic endocrine carcinoma | 2.58e-34 | 1 |
pancreatic cancer | 1.22e-09 | 4 |
germ cell and embryonal cancer | 4.94e-07 | 22 |
germ cell cancer | 4.94e-07 | 22 |
endocrine gland cancer | 7.58e-07 | 6 |