FFCP PHASE1:Hg19::chr1:198324710..198324721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:198324710..198324721,+ | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_at_chr1:198324710..198324721,+ | |description=CAGE_peak_at_chr1:198324710..198324721,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002253!1.48e-12!2;CL:0002563!6.50e-07!4 | |ontology_enrichment_celltype=CL:0002253!1.48e-12!2;CL:0002563!6.50e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.11e-21;2!CL:0002563;2.53e-11;4 | |ontology_enrichment_celltype_v019=CL:0002253;3.11e-21;2!CL:0002563;2.53e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.11e-21,2;CL:0002563,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.46e-17;10!UBERON:0005564;8.46e-17;10 | |ontology_enrichment_development_v019=UBERON:0009117;8.46e-17;10!UBERON:0005564;8.46e-17;10 | ||
|ontology_enrichment_disease=DOID:0050619!2.10e-23!1;DOID:1357!2.10e-23!1 | |ontology_enrichment_disease=DOID:0050619!2.10e-23!1;DOID:1357!2.10e-23!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1 | |ontology_enrichment_disease_v019=DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0001764!2.10e-23!1;UBERON:0001825!2.10e-23!1;UBERON:0002146!5.13e-23!1;UBERON:0005623!5.13e-23!1;UBERON:0000473!4.67e-12!8;UBERON:0003135!5.00e-09!11;UBERON:0002240!1.30e-08!3;UBERON:0003978!1.40e-08!3;UBERON:0009751!1.40e-08!3;UBERON:0000946!1.40e-08!3;UBERON:0002523!1.40e-08!3;UBERON:0005983!1.40e-08!3;UBERON:0002165!1.40e-08!3;UBERON:0002062!1.40e-08!3;UBERON:0007280!1.40e-08!3;UBERON:0001052!6.50e-07!4;UBERON:0001242!6.50e-07!4;UBERON:0001262!6.50e-07!4;UBERON:0004786!6.50e-07!4;UBERON:0004808!6.50e-07!4;UBERON:0001277!6.50e-07!4 | |ontology_enrichment_uberon=UBERON:0001764!2.10e-23!1;UBERON:0001825!2.10e-23!1;UBERON:0002146!5.13e-23!1;UBERON:0005623!5.13e-23!1;UBERON:0000473!4.67e-12!8;UBERON:0003135!5.00e-09!11;UBERON:0002240!1.30e-08!3;UBERON:0003978!1.40e-08!3;UBERON:0009751!1.40e-08!3;UBERON:0000946!1.40e-08!3;UBERON:0002523!1.40e-08!3;UBERON:0005983!1.40e-08!3;UBERON:0002165!1.40e-08!3;UBERON:0002062!1.40e-08!3;UBERON:0007280!1.40e-08!3;UBERON:0001052!6.50e-07!4;UBERON:0001242!6.50e-07!4;UBERON:0001262!6.50e-07!4;UBERON:0004786!6.50e-07!4;UBERON:0004808!6.50e-07!4;UBERON:0001277!6.50e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0000473;1.04e-20;8!UBERON:0003135;2.25e-15;11!UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0004907;2.53e-09;5!UBERON:0000991;1.50e-08;21!UBERON:0003101;3.32e-08;22!UBERON:0000079;3.32e-08;22!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0000473;1.04e-20;8!UBERON:0003135;2.25e-15;11!UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0004907;2.53e-09;5!UBERON:0000991;1.50e-08;21!UBERON:0003101;3.32e-08;22!UBERON:0000079;3.32e-08;22!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0000473,1.10e-20,8;UBERON:0003135,2.33e-15,11;UBERON:0001052,2.53e-11,4;UBERON:0001242,2.53e-11,4;UBERON:0001262,2.53e-11,4;UBERON:0004786,2.53e-11,4;UBERON:0004808,2.53e-11,4;UBERON:0001277,2.53e-11,4;UBERON:0004907,2.53e-09,5;UBERON:0000991,1.53e-08,21;UBERON:0009196,1.53e-08,21;UBERON:0009117,1.53e-08,21;UBERON:0005564,1.53e-08,21;UBERON:0004176,3.39e-08,22;UBERON:0003101,3.39e-08,22;UBERON:0000079,3.39e-08,22 | |||
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|short_description=p@chr1:198324710..198324721,+ | |short_description=p@chr1:198324710..198324721,+ | ||
}} | }} |
Latest revision as of 01:54, 28 July 2015
Short description: | p@chr1:198324710..198324721, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198324710..198324721, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.11e-21 | 2 |
intestinal epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
testis | 1.10e-20 | 8 |
male reproductive organ | 2.33e-15 | 11 |
rectum | 2.53e-11 | 4 |
intestinal mucosa | 2.53e-11 | 4 |
wall of intestine | 2.53e-11 | 4 |
gastrointestinal system mucosa | 2.53e-11 | 4 |
gastrointestinal system epithelium | 2.53e-11 | 4 |
intestinal epithelium | 2.53e-11 | 4 |
lower digestive tract | 2.53e-09 | 5 |
gonad | 1.53e-08 | 21 |
indifferent external genitalia | 1.53e-08 | 21 |
indifferent gonad | 1.53e-08 | 21 |
gonad primordium | 1.53e-08 | 21 |
external genitalia | 3.39e-08 | 22 |
male organism | 3.39e-08 | 22 |
male reproductive system | 3.39e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |