FFCP PHASE1:Hg19::chr21:44591794..44591807,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:44591794..44591807,+
|short_description=p5@CRYAA
|description=CAGE_peak_5_at_CRYAA_5end
|association_with_transcript=-373bp_to_L25781_5end
|EntrezGene=14...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1409 | |EntrezGene=1409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2388 | |HGNC=2388 | ||
|TSSclassifier=strong | |||
|UniProt=Q13684 | |UniProt=Q13684 | ||
|association_with_transcript=-373bp_to_L25781_5end | |||
|cluster_id=chr21:44591794..44591807,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_5_at_CRYAA_5end | |||
|id=chr21:44591794..44591807,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.65e-13!12;CL:0000417!2.65e-13!12;CL:0000668!2.65e-13!12;CL:0000414!2.65e-13!12;CL:0000412!2.65e-13!12;CL:0000182!2.65e-13!12;CL:0000128!2.14e-10!7;CL:0000126!2.14e-10!7;CL:0000127!2.14e-10!7;CL:0002453!2.14e-10!7;CL:0002605!7.70e-07!3;CL:0000064!8.15e-07!3;CL:0005012!8.15e-07!3;CL:0000067!8.15e-07!3;CL:0002304!8.15e-07!3;CL:0002603!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.17e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.36e-41;11!UBERON:0009497;5.97e-35;13!UBERON:0001041;9.35e-16;30!UBERON:0003104;6.04e-15;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.69e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.28e-08!19;UBERON:0006925!1.28e-08!19;UBERON:0008836!1.28e-08!19;UBERON:0000019!2.09e-08!19;UBERON:0000047!2.09e-08!19;UBERON:0004088!2.09e-08!19;UBERON:0003072!2.09e-08!19;UBERON:0003071!2.09e-08!19;UBERON:0004128!2.09e-08!19;UBERON:0000970!5.16e-08!20;UBERON:0002104!1.17e-07!21;UBERON:0001456!1.17e-07!21;UBERON:0005172!1.25e-07!55;UBERON:0005173!1.25e-07!55;UBERON:0008835!1.62e-07!22;UBERON:0003894!1.62e-07!22;UBERON:0009854!3.27e-07!23;UBERON:0000020!4.88e-07!23;UBERON:0007625!6.54e-07!11;UBERON:0002417!7.10e-07!61;UBERON:0000916!7.10e-07!61;UBERON:0001778!8.15e-07!3;UBERON:0001775!8.15e-07!3;UBERON:0001032!9.13e-07!24;UBERON:0004456!9.13e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.84e-24;19!UBERON:0006925;2.84e-24;19!UBERON:0002423;1.05e-18;25!UBERON:0002365;3.84e-14;31!UBERON:0002330;3.84e-14;31!UBERON:0002368;2.51e-13;33!UBERON:0000949;2.03e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60 | |||
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|short_description=p5@CRYAA | |||
}} | }} |
Latest revision as of 16:02, 18 September 2015
Short description: | p5@CRYAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CRYAA_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -373bp_to_L25781_5end |
EntrezGene: | CRYAA |
HGNC: | 2388 |
UniProt: | Q13684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.38e-12 | 39 |