FFCP PHASE1:Hg19::chr21:45627285..45627294,-: Difference between revisions
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|id=chr21:45627285..45627294,-
|short_description=p2@ENST00000423967
|description=CAGE_peak_2_at_ENST00000423967_5end
|association_with_transcript=-3bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000423967_5end | |||
|cluster_id=chr21:45627285..45627294,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_ENST00000423967_5end | |||
|id=chr21:45627285..45627294,- | |||
|ontology_enrichment_celltype=CL:0000945!2.48e-76!24;CL:0000826!2.48e-76!24;CL:0000236!2.07e-53!14;CL:0000542!1.76e-39!53;CL:0000051!1.76e-39!53;CL:0000838!1.62e-36!52;CL:0000738!2.62e-25!140;CL:0002087!5.55e-24!119;CL:0000037!4.40e-21!172;CL:0000566!4.40e-21!172;CL:0000988!1.39e-19!182;CL:0002031!2.47e-17!124;CL:0000784!6.51e-17!3;CL:0002032!8.85e-16!165;CL:0000837!8.85e-16!165;CL:0000842!1.73e-07!3;CL:0000134!7.07e-07!358;CL:0000946!9.67e-07!1;CL:0000786!9.67e-07!1;CL:0000980!9.67e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.24e-85;24!CL:0000236;2.39e-76;13!CL:0000784;2.02e-37;3!CL:0000542;1.06e-28;53!CL:0000946;1.10e-13;1!CL:0000786;1.10e-13;1!CL:0000451;1.08e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.44e-87,14;CL:0000945,1.43e-85,24;CL:0000826,1.43e-85,24;CL:0000838,8.66e-39,52;CL:0000542,4.96e-38,53;CL:0000051,4.96e-38,53;CL:0000784,1.58e-37,3;CL:0000738,1.69e-21,136;CL:0002087,2.25e-19,115;CL:0002031,1.66e-18,120;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000946,1.10e-13,1;CL:0000786,1.10e-13,1;CL:0000980,1.10e-13,1;CL:0002032,2.15e-13,161;CL:0000837,2.15e-13,161;CL:0000451,1.01e-10,10;CL:0000785,1.75e-07,2;CL:0000955,1.75e-07,2;CL:0000818,1.75e-07,2;CL:0000954,1.75e-07,2;CL:0000816,1.75e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.06e-28;53!CL:0000954;1.75e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.73e-08!10;DOID:630!9.15e-07!1;DOID:0050177!9.15e-07!1;DOID:0050427!9.15e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.10e-13;1!DOID:0050177;1.10e-13;1!DOID:0050427;1.10e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.73e-14,1;DOID:0050177,9.73e-14,1;DOID:0050427,9.73e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.67e-07!3;UBERON:0004854!1.67e-07!3;UBERON:0009034!1.67e-07!3;UBERON:0002095!1.67e-07!3;UBERON:0004782!1.67e-07!3;UBERON:0003281!1.67e-07!3;UBERON:0009664!1.67e-07!3;UBERON:0002296!1.67e-07!3;UBERON:0005602!1.67e-07!3;UBERON:0001179!1.67e-07!3;UBERON:0006293!1.67e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.92e-07,371 | |||
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|short_description=p2@ENST00000423967 | |||
}} | }} |
Latest revision as of 18:26, 28 July 2015
Short description: | p2@ENST00000423967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000423967_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -3bp_to_ENST00000423967_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.44e-87 | 14 |
lymphocyte of B lineage | 1.43e-85 | 24 |
pro-B cell | 1.43e-85 | 24 |
lymphoid lineage restricted progenitor cell | 8.66e-39 | 52 |
lymphocyte | 4.96e-38 | 53 |
common lymphoid progenitor | 4.96e-38 | 53 |
plasmacytoid dendritic cell | 1.58e-37 | 3 |
leukocyte | 1.69e-21 | 136 |
nongranular leukocyte | 2.25e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.66e-18 | 120 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
antibody secreting cell | 1.10e-13 | 1 |
plasma cell | 1.10e-13 | 1 |
plasmablast | 1.10e-13 | 1 |
hematopoietic oligopotent progenitor cell | 2.15e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-13 | 161 |
dendritic cell | 1.01e-10 | 10 |
mature B cell | 1.75e-07 | 2 |
pre-B-II cell | 1.75e-07 | 2 |
transitional stage B cell | 1.75e-07 | 2 |
small pre-B-II cell | 1.75e-07 | 2 |
immature B cell | 1.75e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.92e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.73e-14 | 1 |
monogenic disease | 9.73e-14 | 1 |
xeroderma pigmentosum | 9.73e-14 | 1 |