FFCP PHASE1:Hg19::chr4:177608590..177608593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:177608590..177608593,- | |||
|description=CAGE_peak_at_chr4:177608590..177608593,- | |description=CAGE_peak_at_chr4:177608590..177608593,- | ||
|id=chr4:177608590..177608593,- | |id=chr4:177608590..177608593,- | ||
|ontology_enrichment_celltype=CL:0000055!8.83e-20!180;CL:0000057!4.54e-18!75;CL:0002620!7.74e-11!23;CL:0002334!1.09e-09!12;CL:0000144!3.06e-08!625;CL:0002371!9.75e-08!591;CL:0002321!5.40e-07!248;CL:0000220!5.75e-07!246 | |ontology_enrichment_celltype=CL:0000055!8.83e-20!180;CL:0000057!4.54e-18!75;CL:0002620!7.74e-11!23;CL:0002334!1.09e-09!12;CL:0000144!3.06e-08!625;CL:0002371!9.75e-08!591;CL:0002321!5.40e-07!248;CL:0000220!5.75e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.06e-12;12!CL:0002595;1.32e-11;5!CL:0002593;3.84e-08;2!CL:0002583;1.24e-07;2!CL:0000359;2.93e-07;32 | |ontology_enrichment_celltype_v019=CL:0002334;1.06e-12;12!CL:0002595;1.32e-11;5!CL:0002593;3.84e-08;2!CL:0002583;1.24e-07;2!CL:0000359;2.93e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.54e-12,12;CL:0002595,2.54e-11,5;CL:0000057,2.17e-08,76;CL:0002593,7.78e-08,2;CL:0002583,2.37e-07,2;CL:0000359,4.54e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.49e-11!14 | |ontology_enrichment_disease=DOID:2394!2.49e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.71e-27;14!DOID:120;4.24e-13;27!DOID:193;4.93e-12;29 | |ontology_enrichment_disease_v019=DOID:2394;1.71e-27;14!DOID:120;4.24e-13;27!DOID:193;4.93e-12;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.05e-28,14;DOID:120,2.11e-13,27;DOID:193,2.58e-12,29 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.85e-12!95;UBERON:0002199!1.16e-09!45;UBERON:0002416!1.16e-09!45;UBERON:0000914!5.00e-09!83;UBERON:0002329!5.00e-09!83;UBERON:0003077!5.00e-09!83;UBERON:0003059!5.00e-09!83;UBERON:0007282!5.00e-09!83;UBERON:0009618!5.00e-09!83;UBERON:0007285!5.00e-09!83;UBERON:0002097!4.44e-08!40;UBERON:0000486!5.15e-08!82;UBERON:0005256!6.38e-07!143;UBERON:0004290!9.93e-07!70 | |ontology_enrichment_uberon=UBERON:0003102!1.85e-12!95;UBERON:0002199!1.16e-09!45;UBERON:0002416!1.16e-09!45;UBERON:0000914!5.00e-09!83;UBERON:0002329!5.00e-09!83;UBERON:0003077!5.00e-09!83;UBERON:0003059!5.00e-09!83;UBERON:0007282!5.00e-09!83;UBERON:0009618!5.00e-09!83;UBERON:0007285!5.00e-09!83;UBERON:0002097!4.44e-08!40;UBERON:0000486!5.15e-08!82;UBERON:0005256!6.38e-07!143;UBERON:0004290!9.93e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.20e-11;13!UBERON:0003834;1.32e-11;5!UBERON:0001533;1.32e-11;5!UBERON:0002118;6.90e-11;5!UBERON:0004573;3.08e-09;33!UBERON:0004571;3.08e-09;33!UBERON:0000991;7.18e-09;21!UBERON:0003513;2.73e-08;7!UBERON:0002456;3.84e-08;2!UBERON:0002119;4.53e-08;4!UBERON:0005406;4.82e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000992;1.20e-11;13!UBERON:0003834;1.32e-11;5!UBERON:0001533;1.32e-11;5!UBERON:0002118;6.90e-11;5!UBERON:0004573;3.08e-09;33!UBERON:0004571;3.08e-09;33!UBERON:0000991;7.18e-09;21!UBERON:0003513;2.73e-08;7!UBERON:0002456;3.84e-08;2!UBERON:0002119;4.53e-08;4!UBERON:0005406;4.82e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.97e-12,13;UBERON:0003834,2.54e-11,5;UBERON:0001533,2.54e-11,5;UBERON:0002118,2.83e-11,5;UBERON:0004573,3.19e-10,33;UBERON:0004571,3.19e-10,33;UBERON:0000991,2.88e-09,21;UBERON:0009196,2.88e-09,21;UBERON:0009117,2.88e-09,21;UBERON:0005564,2.88e-09,21;UBERON:0004176,8.77e-09,22;UBERON:0002119,2.11e-08,4;UBERON:0003513,4.31e-08,7;UBERON:0005406,4.31e-08,2;UBERON:0002456,7.78e-08,2;UBERON:0003134,1.30e-07,37;UBERON:0000474,1.30e-07,37;UBERON:0001637,1.48e-07,42;UBERON:0003509,1.48e-07,42;UBERON:0004572,1.48e-07,42 | |||
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| ||
|short_description=p@chr4:177608590..177608593,- | |short_description=p@chr4:177608590..177608593,- | ||
}} | }} |
Latest revision as of 03:39, 30 July 2015
Short description: | p@chr4:177608590..177608593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:177608590..177608593, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.54e-12 | 12 |
smooth muscle cell of the subclavian artery | 2.54e-11 | 5 |
fibroblast | 2.17e-08 | 76 |
smooth muscle cell of the internal thoracic artery | 7.78e-08 | 2 |
subcutaneous preadipocyte | 2.37e-07 | 2 |
vascular associated smooth muscle cell | 4.54e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.97e-12 | 13 |
thoracic segment blood vessel | 2.54e-11 | 5 |
subclavian artery | 2.54e-11 | 5 |
right ovary | 2.83e-11 | 5 |
systemic artery | 3.19e-10 | 33 |
systemic arterial system | 3.19e-10 | 33 |
gonad | 2.88e-09 | 21 |
indifferent external genitalia | 2.88e-09 | 21 |
indifferent gonad | 2.88e-09 | 21 |
gonad primordium | 2.88e-09 | 21 |
external genitalia | 8.77e-09 | 22 |
left ovary | 2.11e-08 | 4 |
trunk blood vessel | 4.31e-08 | 7 |
perirenal fat | 4.31e-08 | 2 |
internal thoracic artery | 7.78e-08 | 2 |
female reproductive organ | 1.30e-07 | 37 |
female reproductive system | 1.30e-07 | 37 |
artery | 1.48e-07 | 42 |
arterial blood vessel | 1.48e-07 | 42 |
arterial system | 1.48e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.05e-28 | 14 |
female reproductive organ cancer | 2.11e-13 | 27 |
reproductive organ cancer | 2.58e-12 | 29 |