FFCP PHASE1:Hg19::chr8:38243744..38243765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137994 | |EntrezGene=137994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14648 | |HGNC=14648 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIC7 | |UniProt=E9PIC7 | ||
|association_with_transcript=19bp_to_ENST00000527334_5end | |association_with_transcript=19bp_to_ENST00000527334_5end | ||
|cluster_id=chr8:38243744..38243765,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_11_at_LETM2_5end | |description=CAGE_peak_11_at_LETM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000624!2.89e-13!6;CL:0002274!5.71e-12!5;CL:0000457!5.71e-12!5;CL:0002191!5.71e-12!5;CL:0000097!5.71e-12!5;CL:0000831!5.71e-12!5;CL:0002028!5.71e-12!5;CL:0000838!9.44e-09!52;CL:0000163!9.95e-09!9;CL:0000542!1.68e-08!53;CL:0000051!1.68e-08!53;CL:0000767!1.61e-07!3;CL:0000898!3.39e-07!3;CL:0000623!6.19e-07!3;CL:0000825!6.19e-07!3;CL:0000791!9.28e-07!18;CL:0000789!9.28e-07!18;CL:0002420!9.28e-07!18;CL:0002419!9.28e-07!18;CL:0000790!9.28e-07!18 | |ontology_enrichment_celltype=CL:0000624!2.89e-13!6;CL:0002274!5.71e-12!5;CL:0000457!5.71e-12!5;CL:0002191!5.71e-12!5;CL:0000097!5.71e-12!5;CL:0000831!5.71e-12!5;CL:0002028!5.71e-12!5;CL:0000838!9.44e-09!52;CL:0000163!9.95e-09!9;CL:0000542!1.68e-08!53;CL:0000051!1.68e-08!53;CL:0000767!1.61e-07!3;CL:0000898!3.39e-07!3;CL:0000623!6.19e-07!3;CL:0000825!6.19e-07!3;CL:0000791!9.28e-07!18;CL:0000789!9.28e-07!18;CL:0002420!9.28e-07!18;CL:0002419!9.28e-07!18;CL:0000790!9.28e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.30e-31;5!CL:0000163;1.62e-17;9!CL:0000767;8.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0000097;6.30e-31;5!CL:0000163;1.62e-17;9!CL:0000767;8.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.31e-31,5;CL:0002028,6.31e-31,5;CL:0000163,1.62e-17,9;CL:0000767,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.51e-09;2!UBERON:0002757;1.51e-09;2!UBERON:0010134;1.51e-09;2!UBERON:0005408;1.51e-09;2!UBERON:0001899;1.51e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.51e-09;2!UBERON:0002757;1.51e-09;2!UBERON:0010134;1.51e-09;2!UBERON:0005408;1.51e-09;2!UBERON:0001899;1.51e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.71e-09,2;UBERON:0002757,1.71e-09,2;UBERON:0010134,1.71e-09,2;UBERON:0005408,1.71e-09,2;UBERON:0001899,1.71e-09,2 | |||
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| ||
|short_description=p11@LETM2 | |short_description=p11@LETM2 | ||
}} | }} |
Latest revision as of 03:29, 18 September 2015
Short description: | p11@LETM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LETM2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 19bp_to_ENST00000527334_5end |
EntrezGene: | LETM2 |
HGNC: | 14648 |
UniProt: | E9PIC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.31e-31 | 5 |
basophil mast progenitor cell | 6.31e-31 | 5 |
endocrine cell | 1.62e-17 | 9 |
basophil | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.71e-09 | 2 |
regional part of epithalamus | 1.71e-09 | 2 |
secretory circumventricular organ | 1.71e-09 | 2 |
circumventricular organ | 1.71e-09 | 2 |
epithalamus | 1.71e-09 | 2 |