FFCP PHASE1:Hg19::chr10:4191811..4191817,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4191811..4191817,- | |||
|coexpression_cluster_id=C3016 | |coexpression_cluster_id=C3016 | ||
|description=CAGE_peak_at_chr10:4191811..4191817,- | |description=CAGE_peak_at_chr10:4191811..4191817,- | ||
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|ontology_enrichment_celltype=CL:0000860!2.45e-26!45;CL:0002009!2.69e-21!65;CL:0002194!1.18e-19!63;CL:0000576!1.18e-19!63;CL:0000040!1.18e-19!63;CL:0000559!1.18e-19!63;CL:0002057!3.23e-19!42;CL:0000557!3.72e-19!71;CL:0000766!1.37e-17!76;CL:0000839!2.61e-17!70;CL:0002150!7.44e-14!3;CL:0000861!7.44e-14!3;CL:0000763!2.08e-13!112;CL:0000049!2.08e-13!112;CL:0002087!2.59e-12!119;CL:0000738!3.44e-12!140;CL:0002031!2.16e-10!124;CL:0000037!5.08e-10!172;CL:0000566!5.08e-10!172;CL:0000988!3.46e-09!182;CL:0002032!1.37e-08!165;CL:0000837!1.37e-08!165;CL:0002178!1.98e-07!3;CL:0000842!5.72e-07!3 | |ontology_enrichment_celltype=CL:0000860!2.45e-26!45;CL:0002009!2.69e-21!65;CL:0002194!1.18e-19!63;CL:0000576!1.18e-19!63;CL:0000040!1.18e-19!63;CL:0000559!1.18e-19!63;CL:0002057!3.23e-19!42;CL:0000557!3.72e-19!71;CL:0000766!1.37e-17!76;CL:0000839!2.61e-17!70;CL:0002150!7.44e-14!3;CL:0000861!7.44e-14!3;CL:0000763!2.08e-13!112;CL:0000049!2.08e-13!112;CL:0002087!2.59e-12!119;CL:0000738!3.44e-12!140;CL:0002031!2.16e-10!124;CL:0000037!5.08e-10!172;CL:0000566!5.08e-10!172;CL:0000988!3.46e-09!182;CL:0002032!1.37e-08!165;CL:0000837!1.37e-08!165;CL:0002178!1.98e-07!3;CL:0000842!5.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000083;3.67e-15;4!CL:0000860;7.68e-07;33!CL:0002057;7.68e-07;33 | |ontology_enrichment_celltype_v019=CL:0000083;3.67e-15;4!CL:0000860;7.68e-07;33!CL:0002057;7.68e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,4.55e-15,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!1.93e-11!25;DOID:3493!2.98e-11!2;DOID:4929!3.46e-11!2;DOID:3119!1.37e-08!14;DOID:305!5.59e-08!106 | |ontology_enrichment_disease=DOID:299!1.93e-11!25;DOID:3493!2.98e-11!2;DOID:4929!3.46e-11!2;DOID:3119!1.37e-08!14;DOID:305!5.59e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;8.04e-30;2!DOID:4929;1.08e-29;2!DOID:299;1.83e-20;25!DOID:3111;6.44e-16;1!DOID:3603;6.44e-16;1!DOID:1793;3.67e-15;4!DOID:170;1.99e-10;6!DOID:3119;6.83e-10;14!DOID:4074;2.00e-08;2!DOID:4905;2.00e-08;2!DOID:4468;2.00e-08;2!DOID:3498;2.00e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;8.04e-30;2!DOID:4929;1.08e-29;2!DOID:299;1.83e-20;25!DOID:3111;6.44e-16;1!DOID:3603;6.44e-16;1!DOID:1793;3.67e-15;4!DOID:170;1.99e-10;6!DOID:3119;6.83e-10;14!DOID:4074;2.00e-08;2!DOID:4905;2.00e-08;2!DOID:4468;2.00e-08;2!DOID:3498;2.00e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,8.05e-30,2;DOID:4929,1.24e-29,2;DOID:299,1.77e-20,25;DOID:3111,6.44e-16,1;DOID:3603,6.44e-16,1;DOID:1793,4.55e-15,4;DOID:170,2.29e-10,6;DOID:3119,6.63e-10,14;DOID:4468,1.73e-08,2;DOID:4074,2.31e-08,2;DOID:4905,2.31e-08,2;DOID:3498,2.31e-08,2;DOID:305,5.92e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.53e-16!80;UBERON:0002390!3.61e-15!102;UBERON:0003061!3.61e-15!102;UBERON:0001474!4.21e-15!86;UBERON:0002193!2.10e-13!112;UBERON:0004765!2.99e-12!101;UBERON:0001434!2.99e-12!101;UBERON:0002405!2.90e-10!115 | |ontology_enrichment_uberon=UBERON:0002371!1.53e-16!80;UBERON:0002390!3.61e-15!102;UBERON:0003061!3.61e-15!102;UBERON:0001474!4.21e-15!86;UBERON:0002193!2.10e-13!112;UBERON:0004765!2.99e-12!101;UBERON:0001434!2.99e-12!101;UBERON:0002405!2.90e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.56e-16;1!UBERON:0003703;5.56e-16;1!UBERON:0001174;5.56e-16;1!UBERON:0004914;5.56e-16;1!UBERON:0002394;1.79e-15;4!UBERON:0003928;1.79e-15;4!UBERON:0002294;3.04e-09;7!UBERON:0001173;3.04e-09;7 | |ontology_enrichment_uberon_v019=UBERON:0004913;5.56e-16;1!UBERON:0003703;5.56e-16;1!UBERON:0001174;5.56e-16;1!UBERON:0004914;5.56e-16;1!UBERON:0002394;1.79e-15;4!UBERON:0003928;1.79e-15;4!UBERON:0002294;3.04e-09;7!UBERON:0001173;3.04e-09;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.56e-16,1;UBERON:0003703,5.56e-16,1;UBERON:0001174,5.56e-16,1;UBERON:0004914,5.56e-16,1;UBERON:0002394,1.24e-10,6;UBERON:0003928,1.24e-10,6;UBERON:0002294,2.22e-07,9;UBERON:0001173,2.22e-07,9;UBERON:0004912,2.22e-07,9 | |||
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|short_description=p@chr10:4191811..4191817,- | |short_description=p@chr10:4191811..4191817,- | ||
}} | }} |
Latest revision as of 13:40, 23 July 2015
Short description: | p@chr10:4191811..4191817, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4191811..4191817, - |
Coexpression cluster: | C3016_papillotubular_mucinous_bile_signet_bronchioalveolar_tubular_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 4.55e-15 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.56e-16 | 1 |
extrahepatic bile duct | 5.56e-16 | 1 |
common bile duct | 5.56e-16 | 1 |
duodenal papilla | 5.56e-16 | 1 |
bile duct | 1.24e-10 | 6 |
digestive system duct | 1.24e-10 | 6 |
biliary system | 2.22e-07 | 9 |
biliary tree | 2.22e-07 | 9 |
biliary bud | 2.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.05e-30 | 2 |
tubular adenocarcinoma | 1.24e-29 | 2 |
adenocarcinoma | 1.77e-20 | 25 |
cystadenocarcinoma | 6.44e-16 | 1 |
mucinous cystadenocarcinoma | 6.44e-16 | 1 |
pancreatic cancer | 4.55e-15 | 4 |
endocrine gland cancer | 2.29e-10 | 6 |
gastrointestinal system cancer | 6.63e-10 | 14 |
clear cell adenocarcinoma | 1.73e-08 | 2 |
pancreas adenocarcinoma | 2.31e-08 | 2 |
pancreatic carcinoma | 2.31e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.31e-08 | 2 |
carcinoma | 5.92e-08 | 106 |