FFCP PHASE1:Hg19::chr4:154343190..154343236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:154343190..154343236,+ | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_at_chr4:154343190..154343236,+ | |description=CAGE_peak_at_chr4:154343190..154343236,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000819!2.58e-34!1;CL:0000945!1.46e-22!24;CL:0000826!1.46e-22!24;CL:0000785!6.48e-18!2;CL:0000955!6.48e-18!2;CL:0000818!6.48e-18!2;CL:0000954!6.48e-18!2;CL:0000816!6.48e-18!2;CL:0000817!2.07e-12!3;CL:0000838!9.34e-11!52;CL:0000542!1.45e-10!53;CL:0000051!1.45e-10!53 | |ontology_enrichment_celltype=CL:0000819!2.58e-34!1;CL:0000945!1.46e-22!24;CL:0000826!1.46e-22!24;CL:0000785!6.48e-18!2;CL:0000955!6.48e-18!2;CL:0000818!6.48e-18!2;CL:0000954!6.48e-18!2;CL:0000816!6.48e-18!2;CL:0000817!2.07e-12!3;CL:0000838!9.34e-11!52;CL:0000542!1.45e-10!53;CL:0000051!1.45e-10!53 | ||
|ontology_enrichment_celltype_v019=CL:0000785;3.34e-66;1!CL:0000819;3.34e-66;1!CL:0000945;3.86e-12;24!CL:0000542;9.75e-08;53 | |ontology_enrichment_celltype_v019=CL:0000785;3.34e-66;1!CL:0000819;3.34e-66;1!CL:0000945;3.86e-12;24!CL:0000542;9.75e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000817,3.27e-23,3;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.34e-66;1!CL:0000954;5.96e-34;2!CL:0000051;9.75e-08;53 | |ontology_enrichment_development_v019=UBERON:0001045;3.34e-66;1!CL:0000954;5.96e-34;2!CL:0000051;9.75e-08;53 | ||
|ontology_enrichment_disease=DOID:0060058!5.27e-53!10;DOID:0060073!2.58e-34!1;DOID:8675!2.58e-34!1;DOID:2355!7.06e-34!1;DOID:74!1.07e-17!2;DOID:2531!5.89e-11!51;DOID:0060083!5.89e-11!51;DOID:1287!1.57e-09!4 | |ontology_enrichment_disease=DOID:0060058!5.27e-53!10;DOID:0060073!2.58e-34!1;DOID:8675!2.58e-34!1;DOID:2355!7.06e-34!1;DOID:74!1.07e-17!2;DOID:2531!5.89e-11!51;DOID:0060083!5.89e-11!51;DOID:1287!1.57e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:0060073;3.34e-66;1!DOID:8675;3.34e-66;1!DOID:0060058;2.22e-27;10 | |ontology_enrichment_disease_v019=DOID:0060073;3.34e-66;1!DOID:8675;3.34e-66;1!DOID:0060058;2.22e-27;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.39e-66,1;DOID:8675,2.39e-66,1;DOID:0060058,2.08e-27,10 | |||
|ontology_enrichment_uberon=UBERON:0001154!3.61e-34!1;UBERON:0001153!3.61e-34!1;UBERON:0002372!9.85e-34!1;UBERON:0001961!9.85e-34!1;UBERON:0001744!9.85e-34!1;UBERON:0001735!9.85e-34!1;UBERON:0004907!6.13e-08!5 | |ontology_enrichment_uberon=UBERON:0001154!3.61e-34!1;UBERON:0001153!3.61e-34!1;UBERON:0002372!9.85e-34!1;UBERON:0001961!9.85e-34!1;UBERON:0001744!9.85e-34!1;UBERON:0001735!9.85e-34!1;UBERON:0004907!6.13e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.34e-66;1!UBERON:0001153;3.34e-66;1!UBERON:0009854;3.34e-66;1!UBERON:0009856;9.45e-18;4!UBERON:0004907;1.71e-14;5!UBERON:0001155;1.16e-08;9!UBERON:0000059;2.55e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001154;3.34e-66;1!UBERON:0001153;3.34e-66;1!UBERON:0009854;3.34e-66;1!UBERON:0009856;9.45e-18;4!UBERON:0004907;1.71e-14;5!UBERON:0001155;1.16e-08;9!UBERON:0000059;2.55e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.66e-66,1;UBERON:0001153,4.66e-66,1;UBERON:0001045,4.66e-66,1;UBERON:0004907,1.83e-14,5;UBERON:0001155,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2327440841437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2327440841437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:154343190..154343236,+ | |short_description=p@chr4:154343190..154343236,+ | ||
}} | }} |
Latest revision as of 02:22, 30 July 2015
Short description: | p@chr4:154343190..154343236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:154343190..154343236, + |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.39e-66 | 1 |
mature B cell | 5.04e-34 | 2 |
pre-B-II cell | 5.04e-34 | 2 |
transitional stage B cell | 5.04e-34 | 2 |
small pre-B-II cell | 5.04e-34 | 2 |
immature B cell | 5.04e-34 | 2 |
precursor B cell | 3.27e-23 | 3 |
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.66e-66 | 1 |
caecum | 4.66e-66 | 1 |
midgut | 4.66e-66 | 1 |
lower digestive tract | 1.83e-14 | 5 |
colon | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.39e-66 | 1 |
lymphosarcoma | 2.39e-66 | 1 |
lymphoma | 2.08e-27 | 10 |