FFCP PHASE1:Hg19::chr9:710924..710937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23189 | |EntrezGene=23189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19309 | |HGNC=19309 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_AK026421_5end | |association_with_transcript=-73bp_to_AK026421_5end | ||
|cluster_id=chr9:710924..710937,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_19_at_KANK1_5end | |description=CAGE_peak_19_at_KANK1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!5.20e-07!42 | |ontology_enrichment_celltype=CL:0002057!5.20e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.49e-27;33!CL:0002057;2.49e-27;33!CL:0000473;2.45e-19;39!CL:0000234;2.45e-19;39!CL:0000576;2.93e-11;48!CL:0000766;2.33e-08;69!CL:0000136;1.28e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;2.49e-27;33!CL:0002057;2.49e-27;33!CL:0000473;2.45e-19;39!CL:0000234;2.45e-19;39!CL:0000576;2.93e-11;48!CL:0000766;2.33e-08;69!CL:0000136;1.28e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.37e-22,42;CL:0002057,3.37e-22,42;CL:0000473,6.18e-19,48;CL:0000234,6.18e-19,48;CL:0002194,2.23e-14,59;CL:0000576,2.23e-14,59;CL:0000040,2.23e-14,59;CL:0000559,2.23e-14,59;CL:0002009,8.60e-14,61;CL:0000839,1.76e-12,66;CL:0000557,3.05e-12,67;CL:0000766,3.78e-11,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-16;42!UBERON:0006965;7.60e-09;2 | |ontology_enrichment_development_v019=CL:0002057;3.04e-16;42!UBERON:0006965;7.60e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.77e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!5.77e-10!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-10,76;UBERON:0001474,2.30e-09,82;UBERON:0004765,3.16e-08,90;UBERON:0001434,4.46e-08,100;UBERON:0002405,7.49e-08,93;UBERON:0002390,2.80e-07,98;UBERON:0003061,2.80e-07,98 | |||
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| ||
|short_description=p19@KANK1 | |short_description=p19@KANK1 | ||
}} | }} |
Latest revision as of 16:13, 17 September 2015
Short description: | p19@KANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_KANK1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -73bp_to_AK026421_5end |
EntrezGene: | KANK1 |
HGNC: | 19309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.37e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.37e-22 | 42 |
defensive cell | 6.18e-19 | 48 |
phagocyte | 6.18e-19 | 48 |
monopoietic cell | 2.23e-14 | 59 |
monocyte | 2.23e-14 | 59 |
monoblast | 2.23e-14 | 59 |
promonocyte | 2.23e-14 | 59 |
macrophage dendritic cell progenitor | 8.60e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-12 | 66 |
granulocyte monocyte progenitor cell | 3.05e-12 | 67 |
myeloid leukocyte | 3.78e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-10 | 76 |
bone element | 2.30e-09 | 82 |
skeletal element | 3.16e-08 | 90 |
skeletal system | 4.46e-08 | 100 |
immune system | 7.49e-08 | 93 |
hematopoietic system | 2.80e-07 | 98 |
blood island | 2.80e-07 | 98 |