FFCP PHASE1:Hg19::chr2:72375820..72375849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:72375820..72375849,- | |||
|description=CAGE_peak_at_chr2:72375820..72375849,- | |description=CAGE_peak_at_chr2:72375820..72375849,- | ||
|id=chr2:72375820..72375849,- | |id=chr2:72375820..72375849,- | ||
|ontology_enrichment_celltype=CL:0002617!4.24e-07!2;CL:0002537!8.62e-07!5 | |ontology_enrichment_celltype=CL:0002617!4.24e-07!2;CL:0002537!8.62e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;4.20e-51;5!CL:0000349;4.23e-14;19!CL:0000346;1.04e-10;3!CL:1000428;1.04e-10;3!CL:0000708;1.04e-10;3!CL:0002559;6.21e-07;5 | |ontology_enrichment_celltype_v019=CL:0002537;4.20e-51;5!CL:0000349;4.23e-14;19!CL:0000346;1.04e-10;3!CL:1000428;1.04e-10;3!CL:0000708;1.04e-10;3!CL:0002559;6.21e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.58e-51,5;CL:0000349,4.33e-14,19;CL:0000708,9.90e-11,3;CL:0000346,1.09e-10,3;CL:1000428,1.09e-10,3;CL:0002559,6.39e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.53e-14!14;UBERON:0000158!7.53e-14!14;UBERON:0007023!7.57e-11!115;UBERON:0000305!4.89e-08!7;UBERON:0000478!1.85e-07!24;UBERON:0003124!1.96e-07!7;UBERON:0002950!2.07e-07!2;UBERON:0001891!2.07e-07!2;UBERON:0009616!2.07e-07!2;UBERON:0002360!2.50e-07!2;UBERON:0000094!2.50e-07!2;UBERON:0007645!2.50e-07!2;UBERON:0003127!3.98e-07!2;UBERON:0004871!5.09e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!7.53e-14!14;UBERON:0000158!7.53e-14!14;UBERON:0007023!7.57e-11!115;UBERON:0000305!4.89e-08!7;UBERON:0000478!1.85e-07!24;UBERON:0003124!1.96e-07!7;UBERON:0002950!2.07e-07!2;UBERON:0001891!2.07e-07!2;UBERON:0009616!2.07e-07!2;UBERON:0002360!2.50e-07!2;UBERON:0000094!2.50e-07!2;UBERON:0007645!2.50e-07!2;UBERON:0003127!3.98e-07!2;UBERON:0004871!5.09e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;8.55e-37;7!UBERON:0005631;4.86e-26;10!UBERON:0000158;4.86e-26;10!UBERON:0000478;2.56e-11;24!UBERON:0000412;1.04e-10;3!UBERON:0003210;1.04e-10;3!UBERON:0001992;1.04e-10;3!UBERON:0002346;1.70e-08;4!UBERON:0000923;1.70e-08;4!UBERON:0010316;1.70e-08;4!UBERON:0005291;1.70e-08;4!UBERON:0002050;4.79e-07;5!UBERON:0005423;4.79e-07;5!UBERON:0002073;6.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000305;8.55e-37;7!UBERON:0005631;4.86e-26;10!UBERON:0000158;4.86e-26;10!UBERON:0000478;2.56e-11;24!UBERON:0000412;1.04e-10;3!UBERON:0003210;1.04e-10;3!UBERON:0001992;1.04e-10;3!UBERON:0002346;1.70e-08;4!UBERON:0000923;1.70e-08;4!UBERON:0010316;1.70e-08;4!UBERON:0005291;1.70e-08;4!UBERON:0002050;4.79e-07;5!UBERON:0005423;4.79e-07;5!UBERON:0002073;6.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,9.10e-37,7;UBERON:0004871,2.71e-32,8;UBERON:0005631,7.78e-19,14;UBERON:0000158,7.78e-19,14;UBERON:0000478,2.61e-11,24;UBERON:0003210,9.90e-11,3;UBERON:0000412,1.09e-10,3;UBERON:0001992,1.09e-10,3;UBERON:0004923,2.58e-07,66;UBERON:0002073,6.39e-07,5;UBERON:0005086,6.39e-07,5 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74384027533312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,1.90995587790152,2.37571744666111,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,3.22232987073406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.535928260312357,0,0,0,0,0.258355639344024,0.248298857183432,0,0.445530107947154,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:72375820..72375849,- | |short_description=p@chr2:72375820..72375849,- | ||
}} | }} |
Latest revision as of 12:05, 29 July 2015
Short description: | p@chr2:72375820..72375849, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:72375820..72375849, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.58e-51 | 5 |
extraembryonic cell | 4.33e-14 | 19 |
leptomeningeal cell | 9.90e-11 | 3 |
hair follicle dermal papilla cell | 1.09e-10 | 3 |
stem cell of epidermis | 1.09e-10 | 3 |
hair follicle cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
amnion | 9.10e-37 | 7 |
somatic layer of lateral plate mesoderm | 2.71e-32 | 8 |
extraembryonic membrane | 7.78e-19 | 14 |
membranous layer | 7.78e-19 | 14 |
extraembryonic structure | 2.61e-11 | 24 |
blood-cerebrospinal fluid barrier | 9.90e-11 | 3 |
dermal papilla | 1.09e-10 | 3 |
papillary layer of dermis | 1.09e-10 | 3 |
organ component layer | 2.58e-07 | 66 |
hair follicle | 6.39e-07 | 5 |
hair follicle placode | 6.39e-07 | 5 |