FFCP PHASE1:Hg19::chr11:7927797..7927817,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283299 | |EntrezGene=283299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-295bp_to_ENST00000527847,NR_036678,uc001mfs.1_5end | |association_with_transcript=-295bp_to_ENST00000527847,NR_036678,uc001mfs.1_5end | ||
|cluster_id=chr11:7927797..7927817,- | |||
|coexpression_cluster_id=C195 | |coexpression_cluster_id=C195 | ||
|description=CAGE_peak_1_at_LOC283299_5end | |description=CAGE_peak_1_at_LOC283299_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002076!6.08e-10!43;CL:0002077!1.51e-08!33;CL:0002159!1.65e-08!13;CL:0000066!2.34e-08!254;CL:0002322!6.19e-07!5 | |ontology_enrichment_celltype=CL:0002076!6.08e-10!43;CL:0002077!1.51e-08!33;CL:0002159!1.65e-08!13;CL:0000066!2.34e-08!254;CL:0002322!6.19e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.69e-13;3!CL:0002076;1.09e-11;42!CL:0002251;7.12e-10;20!CL:0002322;1.65e-08;5!CL:0002166;5.48e-07;3!CL:0000197;5.71e-07;6!CL:0000098;5.71e-07;6!CL:0002167;5.71e-07;6 | |ontology_enrichment_celltype_v019=CL:0002621;1.69e-13;3!CL:0002076;1.09e-11;42!CL:0002251;7.12e-10;20!CL:0002322;1.65e-08;5!CL:0002166;5.48e-07;3!CL:0000197;5.71e-07;6!CL:0000098;5.71e-07;6!CL:0002167;5.71e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.03e-13,3;CL:0002076,1.39e-12,42;CL:0002251,8.64e-10,20;CL:0002322,1.53e-08,5;CL:0000223,2.00e-08,58;CL:0000066,8.46e-08,253;CL:0002077,4.52e-07,34;CL:0002166,5.83e-07,3;CL:0000197,6.69e-07,6;CL:0000098,6.69e-07,6;CL:0002167,6.69e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;1.25e-07;14 | |ontology_enrichment_disease_v019=DOID:1749;1.25e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.17e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.39e-10!14;UBERON:0000158!1.39e-10!14;UBERON:0000161!1.08e-08!35;UBERON:0000478!4.25e-08!24;UBERON:0003102!6.39e-08!95;UBERON:0004923!3.02e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!1.39e-10!14;UBERON:0000158!1.39e-10!14;UBERON:0000161!1.08e-08!35;UBERON:0000478!4.25e-08!24;UBERON:0003102!6.39e-08!95;UBERON:0004923!3.02e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.69e-13;3!UBERON:0000161;2.59e-10;19!UBERON:0000166;2.59e-10;19!UBERON:0003729;3.61e-08;13!UBERON:0006947;5.48e-07;3!UBERON:0004054;5.48e-07;3!UBERON:0005631;7.96e-07;10!UBERON:0000158;7.96e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0001949;1.69e-13;3!UBERON:0000161;2.59e-10;19!UBERON:0000166;2.59e-10;19!UBERON:0003729;3.61e-08;13!UBERON:0006947;5.48e-07;3!UBERON:0004054;5.48e-07;3!UBERON:0005631;7.96e-07;10!UBERON:0000158;7.96e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.03e-13,3;UBERON:0000166,1.08e-08,22;UBERON:0003729,4.47e-08,13;UBERON:0001004,3.61e-07,74;UBERON:0006947,5.03e-07,3;UBERON:0004054,5.03e-07,3 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,1.49091585508596,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.635795703478686,0,0,0.515281080091258,0.930584281657949,0.337552664482532,0,0.252433774244115,0.276149695926898,0,0,0,0.508681776931463,1.15956511897978,1.36373060295417,2.58124135850103,1.70763188581434,0.397589304964456,0.464775771478074,2.59152637538426,2.27088765788066,0,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,3.37205259772859,0.301586917234893,0.648119116109707,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,2.85569617938061,2.1266264586358,1.34337784054272,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,0.356857977594324,1.26161932027148,1.52283839490527,0.300946099727719,0,0,0,3.31864503375066,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,1.68808170616869,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,2.6065841139427,0.368323955743585,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.98341898433174,3.2672311452068,25.0120916489385,1.4162089319777,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.577332676353072,0.670302275535787,0,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,1.92283328029452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.18785872333055,0.921482106297696,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.153900517007594,0,0,0.179515288819544,0.108647371922008,0.638002319463839,1.92354946143911,1.5991043280559,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,2.76209081994573,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.685946781900644,1.82824333818845,0.873633341210151,0,0,0,0,0,0,0,0.137041924646751,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.137539436597234,0,0,0,0,0,0.157611414598396,0.314727528809989,0,0,7.10086230081948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0.761610424337591,0,0,0,0,1.99047944349308,0,0,0,0,0,0.643324774124777,0.260994291965212,0.453411851024545,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,1.0362910251936,0,0,0,0,0,2.29326894192489,0,0.633936370075881,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,9.52032869459948,0,1.46742878817343,0.115525666150338,1.90691047733584,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,2.17196126987312,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.0714765441766563,0,0,0,0,2.90102629828252,0.51215543128185,0,1.29068207646083,0.591660003652827,0.170426809518315,2.54032230114557,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,1.0195626881269,0,0,0.0999411559249289,0,1.41157948686277,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,2.95767606251747,0.801652215796681,0.275684698604535,0,0.378893491091197,0,0,0,0.426467963801962,0.476128862927481,0,0.248298857183432,0.560659312903067,0,0,0,0,0.26940821205835,0.717222053926764,1.33064142618405,0.0814032686109745,0.533636729388577,0,0,2.34640942403454,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,1.49091585508596,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.635795703478686,0,0,0.515281080091258,0.930584281657949,0.337552664482532,0,0.252433774244115,0.276149695926898,0,0,0,0.508681776931463,1.15956511897978,1.36373060295417,2.58124135850103,1.70763188581434,0.397589304964456,0.464775771478074,2.59152637538426,2.27088765788066,0,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,3.37205259772859,0.301586917234893,0.648119116109707,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,2.85569617938061,2.1266264586358,1.34337784054272,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,0.356857977594324,1.26161932027148,1.52283839490527,0.300946099727719,0,0,0,3.31864503375066,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,1.68808170616869,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,2.6065841139427,0.368323955743585,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.98341898433174,3.2672311452068,25.0120916489385,1.4162089319777,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.577332676353072,0.670302275535787,0,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,1.92283328029452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.18785872333055,0.921482106297696,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.153900517007594,0,0,0.179515288819544,0.108647371922008,0.638002319463839,1.92354946143911,1.5991043280559,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,2.76209081994573,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.685946781900644,1.82824333818845,0.873633341210151,0,0,0,0,0,0,0,0.137041924646751,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.137539436597234,0,0,0,0,0,0.157611414598396,0.314727528809989,0,0,7.10086230081948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0.761610424337591,0,0,0,0,1.99047944349308,0,0,0,0,0,0.643324774124777,0.260994291965212,0.453411851024545,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,1.0362910251936,0,0,0,0,0,2.29326894192489,0,0.633936370075881,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,9.52032869459948,0,1.46742878817343,0.115525666150338,1.90691047733584,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,2.17196126987312,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.0714765441766563,0,0,0,0,2.90102629828252,0.51215543128185,0,1.29068207646083,0.591660003652827,0.170426809518315,2.54032230114557,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,1.0195626881269,0,0,0.0999411559249289,0,1.41157948686277,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,2.95767606251747,0.801652215796681,0.275684698604535,0,0.378893491091197,0,0,0,0.426467963801962,0.476128862927481,0,0.248298857183432,0.560659312903067,0,0,0,0,0.26940821205835,0.717222053926764,1.33064142618405,0.0814032686109745,0.533636729388577,0,0,2.34640942403454,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p1@LOC283299 | |short_description=p1@LOC283299 | ||
}} | }} |
Latest revision as of 16:40, 24 September 2015
Short description: | p1@LOC283299 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283299_5end |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | -295bp_to_ENST00000527847, NR_036678, uc001mfs.1_5end |
EntrezGene: | LOC283299 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.03e-13 | 3 |
endo-epithelial cell | 1.39e-12 | 42 |
epithelial cell of alimentary canal | 8.64e-10 | 20 |
embryonic stem cell | 1.53e-08 | 5 |
endodermal cell | 2.00e-08 | 58 |
epithelial cell | 8.46e-08 | 253 |
ecto-epithelial cell | 4.52e-07 | 34 |
epithelial cell of Malassez | 5.83e-07 | 3 |
receptor cell | 6.69e-07 | 6 |
sensory epithelial cell | 6.69e-07 | 6 |
olfactory epithelial cell | 6.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.03e-13 | 3 |
oral opening | 1.08e-08 | 22 |
mouth mucosa | 4.47e-08 | 13 |
respiratory system | 3.61e-07 | 74 |
male genital duct | 5.03e-07 | 3 |
internal male genitalia | 5.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.17e-07 | 14 |