FFCP PHASE1:Hg19::chr15:60662593..60662602,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:60662593..60662602,- | |||
|description=CAGE_peak_at_chr15:60662593..60662602,- | |description=CAGE_peak_at_chr15:60662593..60662602,- | ||
|id=chr15:60662593..60662602,- | |id=chr15:60662593..60662602,- | ||
|ontology_enrichment_celltype=CL:0002139!3.17e-41!24;CL:0005020!1.13e-27!6;CL:0002138!1.13e-27!6;CL:0005022!1.13e-27!6;CL:0000115!3.60e-27!35;CL:0000213!1.52e-22!57;CL:0000215!1.52e-22!57;CL:0002078!6.68e-21!44;CL:0000071!3.99e-20!18;CL:0002546!3.99e-20!18;CL:0002618!5.23e-15!3;CL:1000413!3.20e-13!9;CL:0002543!3.95e-13!6;CL:0000222!2.12e-12!119;CL:0002545!1.09e-10!2;CL:0000076!1.76e-08!62;CL:0002544!8.22e-08!6 | |ontology_enrichment_celltype=CL:0002139!3.17e-41!24;CL:0005020!1.13e-27!6;CL:0002138!1.13e-27!6;CL:0005022!1.13e-27!6;CL:0000115!3.60e-27!35;CL:0000213!1.52e-22!57;CL:0000215!1.52e-22!57;CL:0002078!6.68e-21!44;CL:0000071!3.99e-20!18;CL:0002546!3.99e-20!18;CL:0002618!5.23e-15!3;CL:1000413!3.20e-13!9;CL:0002543!3.95e-13!6;CL:0000222!2.12e-12!119;CL:0002545!1.09e-10!2;CL:0000076!1.76e-08!62;CL:0002544!8.22e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.59e-12;6!CL:0002139;4.20e-12;24!CL:1000413;1.16e-08;9!CL:0000115;5.80e-08;36 | |ontology_enrichment_celltype_v019=CL:0002138;2.59e-12;6!CL:0002139;4.20e-12;24!CL:1000413;1.16e-08;9!CL:0000115;5.80e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.74e-12,6;CL:0002138,2.74e-12,6;CL:0005022,2.74e-12,6;CL:0002139,4.20e-12,24;CL:1000413,1.12e-08,9;CL:0000115,1.92e-08,36;CL:0002078,5.75e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.59e-12;6!UBERON:0004872;8.16e-11;7 | |ontology_enrichment_development_v019=CL:0005022;2.59e-12;6!UBERON:0004872;8.16e-11;7 | ||
|ontology_enrichment_disease=DOID:3493!1.58e-09!2 | |ontology_enrichment_disease=DOID:3493!1.58e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!1.29e-20!8;UBERON:0004536!1.29e-20!8;UBERON:0006558!1.29e-20!8;UBERON:0001986!3.99e-20!18;UBERON:0004638!3.99e-20!18;UBERON:0004852!3.99e-20!18;UBERON:0000055!6.52e-18!69;UBERON:0002049!5.44e-17!79;UBERON:0007798!5.44e-17!79;UBERON:0002465!2.24e-16!10;UBERON:0000487!3.64e-16!22;UBERON:0006914!5.01e-14!25;UBERON:0004535!8.03e-14!110;UBERON:0001009!2.51e-13!113;UBERON:0003915!3.20e-13!9;UBERON:0004700!3.20e-13!9;UBERON:0001917!3.20e-13!9;UBERON:0004872!9.30e-11!84;UBERON:0005800!1.09e-10!2;UBERON:0001515!1.09e-10!2;UBERON:0002066!3.46e-09!5;UBERON:0001981!7.34e-09!60;UBERON:0007500!7.34e-09!60;UBERON:0004537!7.34e-09!60;UBERON:0006965!7.34e-09!60;UBERON:0001638!9.05e-09!9;UBERON:0003920!9.05e-09!9;UBERON:0004582!9.05e-09!9;UBERON:0002106!1.52e-07!3;UBERON:0004854!1.52e-07!3;UBERON:0009034!1.52e-07!3;UBERON:0002095!1.52e-07!3;UBERON:0004782!1.52e-07!3;UBERON:0003281!1.52e-07!3;UBERON:0009664!1.52e-07!3;UBERON:0002296!1.52e-07!3;UBERON:0005602!1.52e-07!3;UBERON:0001179!1.52e-07!3;UBERON:0006293!1.52e-07!3 | |ontology_enrichment_uberon=UBERON:0001473!1.29e-20!8;UBERON:0004536!1.29e-20!8;UBERON:0006558!1.29e-20!8;UBERON:0001986!3.99e-20!18;UBERON:0004638!3.99e-20!18;UBERON:0004852!3.99e-20!18;UBERON:0000055!6.52e-18!69;UBERON:0002049!5.44e-17!79;UBERON:0007798!5.44e-17!79;UBERON:0002465!2.24e-16!10;UBERON:0000487!3.64e-16!22;UBERON:0006914!5.01e-14!25;UBERON:0004535!8.03e-14!110;UBERON:0001009!2.51e-13!113;UBERON:0003915!3.20e-13!9;UBERON:0004700!3.20e-13!9;UBERON:0001917!3.20e-13!9;UBERON:0004872!9.30e-11!84;UBERON:0005800!1.09e-10!2;UBERON:0001515!1.09e-10!2;UBERON:0002066!3.46e-09!5;UBERON:0001981!7.34e-09!60;UBERON:0007500!7.34e-09!60;UBERON:0004537!7.34e-09!60;UBERON:0006965!7.34e-09!60;UBERON:0001638!9.05e-09!9;UBERON:0003920!9.05e-09!9;UBERON:0004582!9.05e-09!9;UBERON:0002106!1.52e-07!3;UBERON:0004854!1.52e-07!3;UBERON:0009034!1.52e-07!3;UBERON:0002095!1.52e-07!3;UBERON:0004782!1.52e-07!3;UBERON:0003281!1.52e-07!3;UBERON:0009664!1.52e-07!3;UBERON:0002296!1.52e-07!3;UBERON:0005602!1.52e-07!3;UBERON:0001179!1.52e-07!3;UBERON:0006293!1.52e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0002405;6.40e-11;27!UBERON:0001473;1.41e-09;8!UBERON:0004536;1.41e-09;8!UBERON:0006558;1.41e-09;8!UBERON:0003915;1.16e-08;9!UBERON:0004700;1.16e-08;9!UBERON:0001917;1.16e-08;9!UBERON:0002465;6.34e-08;10!UBERON:0002049;4.59e-07;75!UBERON:0007798;4.59e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0002405;6.40e-11;27!UBERON:0001473;1.41e-09;8!UBERON:0004536;1.41e-09;8!UBERON:0006558;1.41e-09;8!UBERON:0003915;1.16e-08;9!UBERON:0004700;1.16e-08;9!UBERON:0001917;1.16e-08;9!UBERON:0002465;6.34e-08;10!UBERON:0002049;4.59e-07;75!UBERON:0007798;4.59e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0001473,1.47e-09,8;UBERON:0004536,1.47e-09,8;UBERON:0006558,1.47e-09,8;UBERON:0003915,1.12e-08,9;UBERON:0004700,1.12e-08,9;UBERON:0001917,1.12e-08,9;UBERON:0002465,6.56e-08,10;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.67799774483962,0.275118041940067,0,0.516833518338658,1.42306505074684,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.803697554556718,0.898117490504679,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563903507879121,2.38494185502236,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.67799774483962,0.275118041940067,0,0.516833518338658,1.42306505074684,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.803697554556718,0.898117490504679,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563903507879121,2.38494185502236,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:60662593..60662602,- | |short_description=p@chr15:60662593..60662602,- | ||
}} | }} |
Latest revision as of 03:03, 25 July 2015
Short description: | p@chr15:60662593..60662602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:60662593..60662602, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.74e-12 | 6 |
endothelial cell of lymphatic vessel | 2.74e-12 | 6 |
vascular lymphangioblast | 2.74e-12 | 6 |
endothelial cell of vascular tree | 4.20e-12 | 24 |
endothelial cell of artery | 1.12e-08 | 9 |
endothelial cell | 1.92e-08 | 36 |
meso-epithelial cell | 5.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
lymphatic vessel | 1.47e-09 | 8 |
lymph vasculature | 1.47e-09 | 8 |
lymphatic part of lymphoid system | 1.47e-09 | 8 |
endothelial tube | 1.12e-08 | 9 |
arterial system endothelium | 1.12e-08 | 9 |
endothelium of artery | 1.12e-08 | 9 |
lymphoid system | 6.56e-08 | 10 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |