FFCP PHASE1:Hg19::chr4:70707608..70707615,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:70707608..70707615,- | |||
|coexpression_cluster_id=C2795 | |coexpression_cluster_id=C2795 | ||
|description=CAGE_peak_at_chr4:70707608..70707615,- | |description=CAGE_peak_at_chr4:70707608..70707615,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002557!3.74e-10!1;CL:0000342!1.15e-09!1;CL:0002565!1.15e-09!1 | |ontology_enrichment_celltype=CL:0002557!3.74e-10!1;CL:0000342!1.15e-09!1;CL:0002565!1.15e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002557;1.23e-66;1!CL:1000306;9.45e-18;4!CL:0002547;9.45e-18;4 | |ontology_enrichment_celltype_v019=CL:0002557;1.23e-66;1!CL:1000306;9.45e-18;4!CL:0002547;9.45e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002557,1.23e-66,1;CL:1000306,8.69e-18,4;CL:0002547,8.69e-18,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002506!1.15e-09!1;UBERON:0001769!1.15e-09!1;UBERON:0000488!4.23e-09!4;UBERON:0002200!2.72e-07!11;UBERON:0006876!2.72e-07!11 | |ontology_enrichment_uberon=UBERON:0002506!1.15e-09!1;UBERON:0001769!1.15e-09!1;UBERON:0000488!4.23e-09!4;UBERON:0002200!2.72e-07!11;UBERON:0006876!2.72e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;3.61e-34;2!UBERON:0002012;3.61e-34;2!UBERON:0008886;3.61e-34;2!UBERON:0004797;9.45e-18;4!UBERON:0000415;9.45e-18;4!UBERON:0007240;9.45e-18;4!UBERON:0005742;9.45e-18;4!UBERON:0005734;9.45e-18;4!UBERON:0004664;9.45e-18;4!UBERON:0004663;9.45e-18;4!UBERON:0001871;9.43e-11;6!UBERON:0010313;5.73e-08;10!UBERON:0001637;4.40e-07;42!UBERON:0003509;4.40e-07;42!UBERON:0004572;4.40e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000078;3.61e-34;2!UBERON:0002012;3.61e-34;2!UBERON:0008886;3.61e-34;2!UBERON:0004797;9.45e-18;4!UBERON:0000415;9.45e-18;4!UBERON:0007240;9.45e-18;4!UBERON:0005742;9.45e-18;4!UBERON:0005734;9.45e-18;4!UBERON:0004664;9.45e-18;4!UBERON:0004663;9.45e-18;4!UBERON:0001871;9.43e-11;6!UBERON:0010313;5.73e-08;10!UBERON:0001637;4.40e-07;42!UBERON:0003509;4.40e-07;42!UBERON:0004572;4.40e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,3.61e-34,2;UBERON:0007497,3.61e-34,2;UBERON:0003643,3.61e-34,2;UBERON:0003504,3.61e-34,2;UBERON:0003469,3.61e-34,2;UBERON:0003496,3.61e-34,2;UBERON:0002012,3.61e-34,2;UBERON:0008886,3.61e-34,2;UBERON:0007303,3.61e-34,2;UBERON:0002061,3.61e-34,2;UBERON:0005432,3.61e-34,2;UBERON:0004363,3.61e-34,2;UBERON:0004145,2.62e-23,3;UBERON:0000415,8.69e-18,4;UBERON:0007240,8.69e-18,4;UBERON:0005742,8.69e-18,4;UBERON:0005734,8.69e-18,4;UBERON:0004664,8.69e-18,4;UBERON:0004663,8.69e-18,4;UBERON:0003498,1.40e-14,5;UBERON:0005985,1.40e-14,5;UBERON:0010188,2.19e-12,6;UBERON:0002539,2.19e-12,6;UBERON:0003351,2.19e-12,6;UBERON:0008816,2.19e-12,6;UBERON:0004797,8.99e-11,7;UBERON:0001871,9.89e-11,6;UBERON:0000485,1.04e-08,9;UBERON:0010313,5.73e-08,10;UBERON:0002342,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0005062,5.73e-08,10;UBERON:0001637,2.04e-07,42;UBERON:0003509,2.04e-07,42;UBERON:0004572,2.04e-07,42;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64619665163954,0,0,0,0,0,0,0,0.808264032418128,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83580457900053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.429680979473094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64619665163954,0,0,0,0,0,0,0,0.808264032418128,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83580457900053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.429680979473094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:70707608..70707615,- | |short_description=p@chr4:70707608..70707615,- | ||
}} | }} |
Latest revision as of 06:15, 30 July 2015
Short description: | p@chr4:70707608..70707615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:70707608..70707615, - |
Coexpression cluster: | C2795_Fibroblast_Cardiac_Meningeal_Nucleus_lung_uterus_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of pulmonary artery | 1.23e-66 | 1 |
fibroblast of tunica adventitia of artery | 8.69e-18 | 4 |
fibroblast of the aortic adventitia | 8.69e-18 | 4 |