FFCP PHASE1:Hg19::chr22:39413746..39413766,+: Difference between revisions
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|id=chr22:39413746..39413766,+
|short_description=p@chr22:39413746..39413766,+
|description=CAGE_peak_at_chr22:39413746..39413766,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:39413746..39413766,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr22:39413746..39413766,+ | |||
|id=chr22:39413746..39413766,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.94e-42!5;CL:0000039!1.09e-19!7;CL:0000586!1.09e-19!7;CL:0000540!1.18e-13!6;CL:0000031!1.18e-13!6;CL:0000404!1.18e-13!6;CL:0000047!2.27e-10!8;CL:0002550!1.48e-09!1;CL:0000148!3.92e-08!10;CL:0000541!3.92e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.31e-30;6!CL:0000404;1.31e-30;6!CL:0000039;6.03e-26;7!CL:0000586;6.03e-26;7!CL:0002322;1.12e-16;5!CL:0002319;2.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.25e-30,6;CL:0000031,1.25e-30,6;CL:0000404,1.25e-30,6;CL:0000039,5.30e-26,7;CL:0000586,5.30e-26,7;CL:0000047,3.53e-23,8;CL:0002322,1.21e-16,5;CL:0002319,2.54e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.31e-30;6!UBERON:0009117;2.13e-18;10!UBERON:0005564;2.13e-18;10 | |||
|ontology_enrichment_disease=DOID:178!1.76e-09!1;DOID:326!1.76e-09!1;DOID:3978!1.76e-09!1;DOID:3394!1.76e-09!1;DOID:5844!1.76e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.01e-08;22!DOID:2994;1.01e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.68e-09,22;DOID:2994,9.68e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!4.97e-19!11;UBERON:0000473!2.94e-17!8;UBERON:0003101!1.91e-09!22;UBERON:0000079!1.91e-09!22;UBERON:0001301!1.91e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.35e-23;8!UBERON:0003135;8.57e-17;11!UBERON:0000991;4.13e-09;21!UBERON:0003101;1.01e-08;22!UBERON:0000079;1.01e-08;22!UBERON:0000922;1.75e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.47e-23,8;UBERON:0003135,7.90e-17,11;UBERON:0000991,3.96e-09,21;UBERON:0009196,3.96e-09,21;UBERON:0009117,3.96e-09,21;UBERON:0005564,3.96e-09,21;UBERON:0004176,9.68e-09,22;UBERON:0003101,9.68e-09,22;UBERON:0000079,9.68e-09,22 | |||
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|short_description=p@chr22:39413746..39413766,+ | |||
}} | }} |
Latest revision as of 21:21, 28 July 2015
Short description: | p@chr22:39413746..39413766, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:39413746..39413766, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.25e-30 | 6 |
neuroblast | 1.25e-30 | 6 |
electrically signaling cell | 1.25e-30 | 6 |
germ line cell | 5.30e-26 | 7 |
germ cell | 5.30e-26 | 7 |
neuronal stem cell | 3.53e-23 | 8 |
embryonic stem cell | 1.21e-16 | 5 |
neural cell | 2.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 7.47e-23 | 8 |
male reproductive organ | 7.90e-17 | 11 |
gonad | 3.96e-09 | 21 |
indifferent external genitalia | 3.96e-09 | 21 |
indifferent gonad | 3.96e-09 | 21 |
gonad primordium | 3.96e-09 | 21 |
external genitalia | 9.68e-09 | 22 |
male organism | 9.68e-09 | 22 |
male reproductive system | 9.68e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.68e-09 | 22 |
germ cell cancer | 9.68e-09 | 22 |