FFCP PHASE1:Hg19::chr3:48936272..48936353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=788 | |EntrezGene=788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1421 | |HGNC=1421 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPE1,F8WEF6,B4DWZ5 | |UniProt=C9JPE1,F8WEF6,B4DWZ5 | ||
|association_with_transcript=0bp_to_ENST00000430379,ENST00000440964,ENST00000544097_5end | |association_with_transcript=0bp_to_ENST00000430379,ENST00000440964,ENST00000544097_5end | ||
|cluster_id=chr3:48936272..48936353,- | |||
|coexpression_cluster_id=C1874 | |coexpression_cluster_id=C1874 | ||
|description=CAGE_peak_1_at_SLC25A20_5end | |description=CAGE_peak_1_at_SLC25A20_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!6.11e-08!15 | |ontology_enrichment_celltype=CL:0000136!6.11e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.97e-08;13 | |ontology_enrichment_celltype_v019=CL:0000136;1.97e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.11e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!7.85e-12!113;UBERON:0004535!1.45e-10!110;UBERON:0007023!1.69e-10!115;UBERON:0004872!6.96e-08!84;UBERON:0007100!1.31e-07!27;UBERON:0002385!4.44e-07!63;UBERON:0001015!4.44e-07!63;UBERON:0000383!4.44e-07!63;UBERON:0001637!7.79e-07!42;UBERON:0003509!7.79e-07!42;UBERON:0004572!7.79e-07!42;UBERON:0002049!9.30e-07!79;UBERON:0007798!9.30e-07!79 | |ontology_enrichment_uberon=UBERON:0001009!7.85e-12!113;UBERON:0004535!1.45e-10!110;UBERON:0007023!1.69e-10!115;UBERON:0004872!6.96e-08!84;UBERON:0007100!1.31e-07!27;UBERON:0002385!4.44e-07!63;UBERON:0001015!4.44e-07!63;UBERON:0000383!4.44e-07!63;UBERON:0001637!7.79e-07!42;UBERON:0003509!7.79e-07!42;UBERON:0004572!7.79e-07!42;UBERON:0002049!9.30e-07!79;UBERON:0007798!9.30e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.52e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0007100;4.52e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,5.82e-12,112;UBERON:0004535,1.10e-10,109;UBERON:0007023,1.65e-10,114;UBERON:0004872,5.34e-08,83;UBERON:0007100,1.31e-07,27;UBERON:0002385,6.58e-07,64;UBERON:0001015,6.58e-07,64;UBERON:0000383,6.58e-07,64;UBERON:0002049,7.31e-07,78;UBERON:0007798,7.31e-07,78;UBERON:0001637,7.79e-07,42;UBERON:0003509,7.79e-07,42;UBERON:0004572,7.79e-07,42;UBERON:0007524,8.53e-07,73;UBERON:0000055,8.87e-07,68 | |||
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| ||
|short_description=p1@SLC25A20 | |short_description=p1@SLC25A20 | ||
}} | }} |
Latest revision as of 15:17, 18 September 2015
Short description: | p1@SLC25A20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC25A20_5end |
Coexpression cluster: | C1874_left_Hepatocyte_liver_heart_Adipocyte_mature_small |
Association with transcript: | 0bp_to_ENST00000430379, ENST00000440964, ENST00000544097_5end |
EntrezGene: | SLC25A20 |
HGNC: | 1421 |
UniProt: | C9JPE1F8WEF6B4DWZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.11e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 5.82e-12 | 112 |
cardiovascular system | 1.10e-10 | 109 |
adult organism | 1.65e-10 | 114 |
splanchnic layer of lateral plate mesoderm | 5.34e-08 | 83 |
primary circulatory organ | 1.31e-07 | 27 |
muscle tissue | 6.58e-07 | 64 |
musculature | 6.58e-07 | 64 |
musculature of body | 6.58e-07 | 64 |
vasculature | 7.31e-07 | 78 |
vascular system | 7.31e-07 | 78 |
artery | 7.79e-07 | 42 |
arterial blood vessel | 7.79e-07 | 42 |
arterial system | 7.79e-07 | 42 |
dense mesenchyme tissue | 8.53e-07 | 73 |
vessel | 8.87e-07 | 68 |