FFCP PHASE1:Hg19::chr7:79998932..79998956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt=P16671 | |UniProt=P16671 | ||
|association_with_transcript=41bp_to_ENST00000435819,uc003uhc.2_5end | |association_with_transcript=41bp_to_ENST00000435819,uc003uhc.2_5end | ||
|cluster_id=chr7:79998932..79998956,+ | |||
|coexpression_cluster_id=C557 | |coexpression_cluster_id=C557 | ||
|description=CAGE_peak_17_at_CD36_5end | |description=CAGE_peak_17_at_CD36_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!2.44e-18!6;CL:0002138!2.44e-18!6;CL:0005022!2.44e-18!6;CL:0002144!1.10e-13!3;CL:0002139!2.16e-10!24;CL:0000115!2.36e-10!35;CL:0002078!7.82e-08!44 | |ontology_enrichment_celltype=CL:0005020!2.44e-18!6;CL:0002138!2.44e-18!6;CL:0005022!2.44e-18!6;CL:0002144!1.10e-13!3;CL:0002139!2.16e-10!24;CL:0000115!2.36e-10!35;CL:0002078!7.82e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.99e-41;6!CL:0002139;5.39e-23;24!CL:0002144;1.17e-21;3!CL:0000115;3.72e-11;36!CL:0002078;1.25e-10;45!CL:0000062;1.11e-07;9 | |ontology_enrichment_celltype_v019=CL:0002138;1.99e-41;6!CL:0002139;5.39e-23;24!CL:0002144;1.17e-21;3!CL:0000115;3.72e-11;36!CL:0002078;1.25e-10;45!CL:0000062;1.11e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.99e-41,6;CL:0002138,1.99e-41,6;CL:0005022,1.99e-41,6;CL:0002139,5.39e-23,24;CL:0002144,1.17e-21,3;CL:0000115,2.80e-15,36;CL:0002078,3.51e-12,45;CL:0000213,2.15e-09,58;CL:0000215,2.15e-09,58 | |||
|ontology_enrichment_development_v019=CL:0005022;1.99e-41;6 | |ontology_enrichment_development_v019=CL:0005022;1.99e-41;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;9.58e-17;1!DOID:4549;9.58e-17;1!DOID:5861;9.58e-17;1!DOID:6496;9.58e-17;1 | |ontology_enrichment_disease_v019=DOID:3371;9.58e-17;1!DOID:4549;9.58e-17;1!DOID:5861;9.58e-17;1!DOID:6496;9.58e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.04e-16,1;DOID:4549,1.04e-16,1;DOID:5861,1.04e-16,1;DOID:6496,1.04e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002465!2.56e-20!10;UBERON:0001915!1.10e-13!3;UBERON:0001982!1.10e-13!3;UBERON:0001473!1.14e-13!8;UBERON:0004536!1.14e-13!8;UBERON:0006558!1.14e-13!8;UBERON:0007023!1.17e-12!115;UBERON:0000341!5.10e-09!2 | |ontology_enrichment_uberon=UBERON:0002465!2.56e-20!10;UBERON:0001915!1.10e-13!3;UBERON:0001982!1.10e-13!3;UBERON:0001473!1.14e-13!8;UBERON:0004536!1.14e-13!8;UBERON:0006558!1.14e-13!8;UBERON:0007023!1.17e-12!115;UBERON:0000341!5.10e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002465;2.36e-38;10!UBERON:0001473;3.36e-31;8!UBERON:0004536;3.36e-31;8!UBERON:0006558;3.36e-31;8!UBERON:0010523;1.17e-21;3!UBERON:0001915;1.17e-21;3!UBERON:0001982;1.17e-21;3!UBERON:0000029;2.25e-16;1!UBERON:0002405;2.72e-14;27!UBERON:0002193;1.73e-08;42!UBERON:0001474;3.15e-08;18!UBERON:0000055;6.12e-08;65 | |ontology_enrichment_uberon_v019=UBERON:0002465;2.36e-38;10!UBERON:0001473;3.36e-31;8!UBERON:0004536;3.36e-31;8!UBERON:0006558;3.36e-31;8!UBERON:0010523;1.17e-21;3!UBERON:0001915;1.17e-21;3!UBERON:0001982;1.17e-21;3!UBERON:0000029;2.25e-16;1!UBERON:0002405;2.72e-14;27!UBERON:0002193;1.73e-08;42!UBERON:0001474;3.15e-08;18!UBERON:0000055;6.12e-08;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.03e-38,10;UBERON:0001473,3.36e-31,8;UBERON:0004536,3.36e-31,8;UBERON:0006558,3.36e-31,8;UBERON:0010523,1.17e-21,3;UBERON:0001915,1.17e-21,3;UBERON:0001982,1.17e-21,3;UBERON:0000029,1.65e-16,1;UBERON:0000055,5.71e-08,68;UBERON:0002049,6.58e-07,78;UBERON:0007798,6.58e-07,78 | |||
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| ||
|short_description=p17@CD36 | |short_description=p17@CD36 | ||
}} | }} |
Latest revision as of 16:21, 19 September 2015
Short description: | p17@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CD36_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | 41bp_to_ENST00000435819, uc003uhc.2_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | P16671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.99e-41 | 6 |
endothelial cell of lymphatic vessel | 1.99e-41 | 6 |
vascular lymphangioblast | 1.99e-41 | 6 |
endothelial cell of vascular tree | 5.39e-23 | 24 |
capillary endothelial cell | 1.17e-21 | 3 |
endothelial cell | 2.80e-15 | 36 |
meso-epithelial cell | 3.51e-12 | 45 |
lining cell | 2.15e-09 | 58 |
barrier cell | 2.15e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.03e-38 | 10 |
lymphatic vessel | 3.36e-31 | 8 |
lymph vasculature | 3.36e-31 | 8 |
lymphatic part of lymphoid system | 3.36e-31 | 8 |
microcirculatory vessel | 1.17e-21 | 3 |
endothelium of capillary | 1.17e-21 | 3 |
capillary | 1.17e-21 | 3 |
lymph node | 1.65e-16 | 1 |
vessel | 5.71e-08 | 68 |
vasculature | 6.58e-07 | 78 |
vascular system | 6.58e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.04e-16 | 1 |
extraosseous chondrosarcoma | 1.04e-16 | 1 |
myxoid chondrosarcoma | 1.04e-16 | 1 |
extraskeletal myxoid chondrosarcoma | 1.04e-16 | 1 |