FFCP PHASE1:Hg19::chr2:100759076..100759088,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:100759076..100759088,-
|short_description=p10@AFF3
|description=CAGE_peak_10_at_AFF3_5end
|association_with_transcript=-31bp_to_ENST00000416492_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3899 | |EntrezGene=3899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6473 | |HGNC=6473 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMS1 | |UniProt=C9JMS1 | ||
|association_with_transcript=-31bp_to_ENST00000416492_5end | |||
|cluster_id=chr2:100759076..100759088,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_10_at_AFF3_5end | |||
|id=chr2:100759076..100759088,- | |||
|ontology_enrichment_celltype=CL:0000945!1.36e-32!24;CL:0000826!1.36e-32!24;CL:0000542!1.06e-28!53;CL:0000051!1.06e-28!53;CL:0000236!1.22e-27!14;CL:0000838!2.56e-27!52;CL:0000037!3.78e-25!172;CL:0000566!3.78e-25!172;CL:0000988!8.34e-23!182;CL:0000738!3.37e-19!140;CL:0002032!4.20e-19!165;CL:0000837!4.20e-19!165;CL:0002087!7.32e-17!119;CL:0002031!1.56e-14!124 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.35e-50;13!CL:0000945;1.92e-39;24!CL:0000542;2.24e-20;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.29e-46,14;CL:0000945,1.91e-39,24;CL:0000826,1.91e-39,24;CL:0000542,1.46e-27,53;CL:0000051,1.46e-27,53;CL:0000838,1.79e-25,52;CL:0000037,7.60e-21,168;CL:0000988,2.35e-19,177;CL:0002032,2.67e-15,161;CL:0000837,2.67e-15,161;CL:0000738,7.65e-14,136;CL:0002087,2.81e-13,115;CL:0002031,3.64e-10,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.24e-20;53 | |||
|ontology_enrichment_disease=DOID:2531!3.43e-14!51;DOID:0060083!3.43e-14!51;DOID:1240!4.79e-10!39;DOID:8692!1.84e-07!31;DOID:0060058!5.26e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.54e-10;39!DOID:2531;5.14e-10;51!DOID:0060083;5.14e-10;51!DOID:0060058;9.94e-10;10!DOID:8692;7.14e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.74e-19,51;DOID:0060083,1.74e-19,51;DOID:1240,4.09e-13,39;DOID:0060058,9.87e-10,10;DOID:8692,5.03e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.22e-08!15;UBERON:0000179!4.22e-08!15;UBERON:0000463!4.22e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.92e-12;5!UBERON:0005057;3.92e-12;5!UBERON:0002370;1.82e-08;2!UBERON:0005058;1.82e-08;2!UBERON:0009113;1.82e-08;2!UBERON:0002405;1.21e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.41e-09,7;UBERON:0005057,8.41e-09,7 | |||
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| ||
|short_description=p10@AFF3 | |||
}} | }} |
Latest revision as of 22:45, 15 September 2015
Short description: | p10@AFF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AFF3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -31bp_to_ENST00000416492_5end |
EntrezGene: | AFF3 |
HGNC: | 6473 |
UniProt: | C9JMS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.29e-46 | 14 |
lymphocyte of B lineage | 1.91e-39 | 24 |
pro-B cell | 1.91e-39 | 24 |
lymphocyte | 1.46e-27 | 53 |
common lymphoid progenitor | 1.46e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.79e-25 | 52 |
hematopoietic stem cell | 7.60e-21 | 168 |
hematopoietic cell | 2.35e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.67e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.67e-15 | 161 |
leukocyte | 7.65e-14 | 136 |
nongranular leukocyte | 2.81e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.64e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.41e-09 | 7 |
immune organ | 8.41e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.74e-19 | 51 |
immune system cancer | 1.74e-19 | 51 |
leukemia | 4.09e-13 | 39 |
lymphoma | 9.87e-10 | 10 |
myeloid leukemia | 5.03e-08 | 31 |