FFCP PHASE1:Hg19::chr2:105030478..105030489,-: Difference between revisions
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|id=chr2:105030478..105030489,-
|short_description=p1@ENST00000449772
|description=CAGE_peak_1_at_ENST00000449772_5end
|association_with_transcript=-12bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000449772_5end | |||
|cluster_id=chr2:105030478..105030489,- | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_1_at_ENST00000449772_5end | |||
|id=chr2:105030478..105030489,- | |||
|ontology_enrichment_celltype=CL:0000181!7.12e-08!12;CL:0000417!7.12e-08!12;CL:0000668!7.12e-08!12;CL:0000414!7.12e-08!12;CL:0000412!7.12e-08!12;CL:0000182!7.12e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.94e-17;12!CL:0002535;1.65e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.84e-17,12;CL:0002535,1.65e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.75e-09;11!UBERON:0009497;1.00e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!5.98e-13!26;UBERON:0002107!9.88e-13!19;UBERON:0006925!9.88e-13!19;UBERON:0008836!9.88e-13!19;UBERON:0008835!5.61e-11!22;UBERON:0003894!5.61e-11!22;UBERON:0001301!8.22e-11!1;UBERON:0001882!1.33e-10!1;UBERON:0005403!1.33e-10!1;UBERON:0009854!1.71e-10!23;UBERON:0002022!1.77e-10!1;UBERON:0005172!3.50e-10!55;UBERON:0005173!3.50e-10!55;UBERON:0007499!1.22e-09!25;UBERON:0009497!1.22e-09!25;UBERON:0000015!1.22e-09!25;UBERON:0002423!1.22e-09!25;UBERON:0006235!1.22e-09!25;UBERON:0004161!1.22e-09!25;UBERON:0002368!1.65e-09!35;UBERON:0009856!2.90e-09!26;UBERON:0002417!4.39e-09!61;UBERON:0000916!4.39e-09!61;UBERON:0002365!9.65e-08!31;UBERON:0002330!9.65e-08!31;UBERON:0000949!2.72e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.76e-29;19!UBERON:0006925;5.76e-29;19!UBERON:0002423;4.24e-22;25!UBERON:0002365;7.80e-18;31!UBERON:0002330;7.80e-18;31!UBERON:0002368;1.98e-15;33!UBERON:0006955;1.65e-12;2!UBERON:0004801;1.65e-12;2!UBERON:0000949;3.07e-11;43!UBERON:0005172;3.71e-08;52!UBERON:0005173;3.71e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.44e-29,19;UBERON:0006925,5.44e-29,19;UBERON:0008836,5.44e-29,19;UBERON:0008835,4.35e-25,22;UBERON:0003894,4.35e-25,22;UBERON:0009854,5.18e-24,23;UBERON:0007499,4.06e-22,25;UBERON:0009497,4.06e-22,25;UBERON:0000015,4.06e-22,25;UBERON:0002423,4.06e-22,25;UBERON:0006235,4.06e-22,25;UBERON:0004161,4.06e-22,25;UBERON:0009856,2.80e-21,26;UBERON:0002365,6.78e-18,31;UBERON:0002330,6.78e-18,31;UBERON:0002368,7.01e-16,35;UBERON:0006955,1.65e-12,2;UBERON:0004801,1.65e-12,2;UBERON:0000949,2.12e-12,45;UBERON:0003929,2.31e-10,54;UBERON:0005172,2.31e-10,54;UBERON:0005173,2.31e-10,54;UBERON:0002530,1.69e-09,59;UBERON:0002417,2.42e-09,60;UBERON:0000916,2.42e-09,60;UBERON:0005911,7.32e-07,82 | |||
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|short_description=p1@ENST00000449772 | |||
}} | }} |
Latest revision as of 22:54, 28 July 2015
Short description: | p1@ENST00000449772 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000449772_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | -12bp_to_ENST00000449772_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.84e-17 | 12 |
epithelial cell of cervix | 1.65e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 5.44e-29 | 19 |
digestive gland | 5.44e-29 | 19 |
liver bud | 5.44e-29 | 19 |
hepatic diverticulum | 4.35e-25 | 22 |
liver primordium | 4.35e-25 | 22 |
digestive tract diverticulum | 5.18e-24 | 23 |
epithelial sac | 4.06e-22 | 25 |
epithelium of foregut-midgut junction | 4.06e-22 | 25 |
anatomical boundary | 4.06e-22 | 25 |
hepatobiliary system | 4.06e-22 | 25 |
foregut-midgut junction | 4.06e-22 | 25 |
septum transversum | 4.06e-22 | 25 |
sac | 2.80e-21 | 26 |
exocrine gland | 6.78e-18 | 31 |
exocrine system | 6.78e-18 | 31 |
endocrine gland | 7.01e-16 | 35 |
uterine epithelium | 1.65e-12 | 2 |
cervix epithelium | 1.65e-12 | 2 |
endocrine system | 2.12e-12 | 45 |
gut epithelium | 2.31e-10 | 54 |
abdomen element | 2.31e-10 | 54 |
abdominal segment element | 2.31e-10 | 54 |
gland | 1.69e-09 | 59 |
abdominal segment of trunk | 2.42e-09 | 60 |
abdomen | 2.42e-09 | 60 |
endo-epithelium | 7.32e-07 | 82 |