FFCP PHASE1:Hg19::chr2:121003683..121003689,-: Difference between revisions
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|id=chr2:121003683..121003689,-
|short_description=p@chr2:121003683..121003689,-
|description=CAGE_peak_at_chr2:121003683..121003689,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:121003683..121003689,- | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_at_chr2:121003683..121003689,- | |||
|id=chr2:121003683..121003689,- | |||
|ontology_enrichment_celltype=CL:0002563!8.78e-10!4;CL:0000066!1.84e-09!254;CL:0002150!4.63e-08!3;CL:0000861!4.63e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.47e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.47e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.15e-10;1 | |||
|ontology_enrichment_disease=DOID:305!3.17e-26!106;DOID:0050687!1.21e-19!143;DOID:14566!1.24e-16!239;DOID:162!2.05e-16!235;DOID:299!9.24e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.15e-10;1!DOID:3149;1.15e-10;1!DOID:4362;9.91e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.33e-10,1;DOID:3149,1.33e-10,1;DOID:162,5.09e-09,235;DOID:14566,8.96e-09,239;DOID:4362,1.09e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.81e-19!9;UBERON:0004921!5.37e-12!129;UBERON:0004185!5.37e-12!129;UBERON:0001046!5.46e-12!19;UBERON:0003350!1.98e-11!5;UBERON:0000077!2.69e-10!130;UBERON:0001007!5.47e-10!155;UBERON:0001555!5.47e-10!155;UBERON:0007026!5.47e-10!155;UBERON:0001242!8.78e-10!4;UBERON:0001262!8.78e-10!4;UBERON:0004786!8.78e-10!4;UBERON:0004808!8.78e-10!4;UBERON:0001277!8.78e-10!4;UBERON:0004119!4.40e-09!169;UBERON:0000925!4.40e-09!169;UBERON:0006595!4.40e-09!169;UBERON:0002367!7.99e-09!11;UBERON:0010147!7.99e-09!11;UBERON:0009846!7.99e-09!11;UBERON:0003353!7.99e-09!11;UBERON:0004902!7.99e-09!11;UBERON:0003820!7.99e-09!11;UBERON:0009847!7.99e-09!11;UBERON:0000162!1.33e-08!14;UBERON:0001353!1.33e-08!14;UBERON:0000163!1.33e-08!14;UBERON:0006866!1.33e-08!14;UBERON:0000164!1.33e-08!14;UBERON:0000931!1.33e-08!14;UBERON:0001557!3.55e-08!19;UBERON:0003937!5.41e-08!12;UBERON:0005399!5.41e-08!12;UBERON:0004122!6.22e-08!15;UBERON:0005409!1.79e-07!35;UBERON:0000160!2.03e-07!27;UBERON:0008947!6.40e-07!38;UBERON:0003258!6.40e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;7.47e-11;4!UBERON:0000989;1.15e-10;1!UBERON:0008811;1.15e-10;1!UBERON:0001242;1.47e-10;4!UBERON:0001262;1.47e-10;4!UBERON:0004786;1.47e-10;4!UBERON:0004808;1.47e-10;4!UBERON:0001277;1.47e-10;4!UBERON:0004907;7.42e-09;5!UBERON:0000002;2.06e-07;6!UBERON:0001560;2.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.47e-11,4;UBERON:0000989,9.97e-11,1;UBERON:0008811,9.97e-11,1;UBERON:0006258,9.97e-11,1;UBERON:0005876,9.97e-11,1;UBERON:0004874,9.97e-11,1;UBERON:0001242,1.47e-10,4;UBERON:0001262,1.47e-10,4;UBERON:0004786,1.47e-10,4;UBERON:0004808,1.47e-10,4;UBERON:0001277,1.47e-10,4;UBERON:0004907,7.43e-09,5;UBERON:0000002,2.23e-07,6;UBERON:0001560,2.23e-07,6 | |||
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| ||
|short_description=p@chr2:121003683..121003689,- | |||
}} | }} |
Latest revision as of 23:56, 28 July 2015
Short description: | p@chr2:121003683..121003689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:121003683..121003689, - |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.47e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 7.47e-11 | 4 |
penis | 9.97e-11 | 1 |
intromittent organ | 9.97e-11 | 1 |
lateral plate mesenchyme | 9.97e-11 | 1 |
undifferentiated genital tubercle | 9.97e-11 | 1 |
somatopleure | 9.97e-11 | 1 |
intestinal mucosa | 1.47e-10 | 4 |
wall of intestine | 1.47e-10 | 4 |
gastrointestinal system mucosa | 1.47e-10 | 4 |
gastrointestinal system epithelium | 1.47e-10 | 4 |
intestinal epithelium | 1.47e-10 | 4 |
lower digestive tract | 7.43e-09 | 5 |
uterine cervix | 2.23e-07 | 6 |
neck of organ | 2.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.33e-10 | 1 |
keratoacanthoma | 1.33e-10 | 1 |
cancer | 5.09e-09 | 235 |
disease of cellular proliferation | 8.96e-09 | 239 |
cervical cancer | 1.09e-08 | 5 |