FFCP PHASE1:Mm9::chr5:66382473..66382485,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2313 | |MCL_coexpression_id=2313 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:66382473..66382485,- | |||
|description=CAGE_peak_at_chr5:66382473..66382485,- | |description=CAGE_peak_at_chr5:66382473..66382485,- | ||
|id=chr5:66382473..66382485,- | |id=chr5:66382473..66382485,- | ||
|ontology_enrichment_celltype=CL:0002563!2.29e-21!9;CL:0002251!2.29e-21!9;CL:0000239!3.19e-15!6;CL:0000677!3.19e-15!6;CL:0000212!3.19e-15!6;CL:0000584!3.19e-15!6;CL:0002076!1.41e-14!15;CL:0000066!9.36e-14!25;CL:0000075!6.38e-13!7;CL:0000223!2.20e-10!20;CL:0000473!6.96e-08!3;CL:0000627!6.96e-08!3;CL:0000682!6.96e-08!3;CL:0002250!1.00e-07!3;CL:0000063!2.60e-07!66 | |ontology_enrichment_celltype=CL:0002563!2.29e-21!9;CL:0002251!2.29e-21!9;CL:0000239!3.19e-15!6;CL:0000677!3.19e-15!6;CL:0000212!3.19e-15!6;CL:0000584!3.19e-15!6;CL:0002076!1.41e-14!15;CL:0000066!9.36e-14!25;CL:0000075!6.38e-13!7;CL:0000223!2.20e-10!20;CL:0000473!6.96e-08!3;CL:0000627!6.96e-08!3;CL:0000682!6.96e-08!3;CL:0002250!1.00e-07!3;CL:0000063!2.60e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.49e-37,9;CL:0002251,5.49e-37,9;CL:0000239,4.44e-32,6;CL:0000677,4.44e-32,6;CL:0000584,4.44e-32,6;CL:0000075,1.85e-27,7;CL:0002076,7.08e-22,15;CL:0000066,6.90e-20,25;CL:0000223,3.42e-16,20;CL:0000682,8.07e-08,3;CL:0002250,9.44e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.23e-34!15;UBERON:0001242!1.89e-29!13;UBERON:0000060!1.89e-29!13;UBERON:0001262!1.89e-29!13;UBERON:0004786!1.89e-29!13;UBERON:0003350!2.29e-21!9;UBERON:0004808!2.29e-21!9;UBERON:0001277!2.29e-21!9;UBERON:0004923!9.11e-20!24;UBERON:0000160!3.30e-17!43;UBERON:0000485!3.96e-17!11;UBERON:0005409!5.50e-17!59;UBERON:0001007!9.15e-08!128;UBERON:0001555!9.15e-08!128;UBERON:0007026!9.15e-08!128;UBERON:0004119!1.51e-07!130;UBERON:0000925!1.51e-07!130;UBERON:0006595!1.51e-07!130;UBERON:0000331!3.41e-07!3;UBERON:0002116!3.41e-07!3;UBERON:0001204!3.41e-07!3;UBERON:0001168!3.41e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!6.23e-34!15;UBERON:0001242!1.89e-29!13;UBERON:0000060!1.89e-29!13;UBERON:0001262!1.89e-29!13;UBERON:0004786!1.89e-29!13;UBERON:0003350!2.29e-21!9;UBERON:0004808!2.29e-21!9;UBERON:0001277!2.29e-21!9;UBERON:0004923!9.11e-20!24;UBERON:0000160!3.30e-17!43;UBERON:0000485!3.96e-17!11;UBERON:0005409!5.50e-17!59;UBERON:0001007!9.15e-08!128;UBERON:0001555!9.15e-08!128;UBERON:0007026!9.15e-08!128;UBERON:0004119!1.51e-07!130;UBERON:0000925!1.51e-07!130;UBERON:0006595!1.51e-07!130;UBERON:0000331!3.41e-07!3;UBERON:0002116!3.41e-07!3;UBERON:0001204!3.41e-07!3;UBERON:0001168!3.41e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.39e-49,15;UBERON:0001242,1.88e-39,13;UBERON:0001262,1.88e-39,13;UBERON:0004786,1.88e-39,13;UBERON:0003350,5.49e-37,9;UBERON:0004808,5.49e-37,9;UBERON:0001277,5.49e-37,9;UBERON:0000485,4.00e-30,11;UBERON:0004923,4.60e-30,24;UBERON:0000160,4.21e-19,31;UBERON:0005409,1.65e-14,47;UBERON:0001962,2.39e-11,2;UBERON:0001961,2.39e-11,2;UBERON:0001744,2.39e-11,2;UBERON:0001007,3.68e-08,116;UBERON:0001555,3.68e-08,116;UBERON:0007026,3.68e-08,116;UBERON:0004119,5.52e-08,118;UBERON:0000925,5.52e-08,118;UBERON:0006595,5.52e-08,118;UBERON:0002465,7.46e-08,3 | |||
|phase1_expression=0,2.79180326111489,11.3749809847384,4.83942738090928,5.00895729946347,2.68606835059024,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,3.03985603307473,1.37645568640302,4.01962374880514,0.86152399231815,1.29282739611533,0.380046838912748,0.504060259519861,1.10865255327652,0,0,0,0.577703239502549,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26046957459495,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0.898819408654221,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,11.3749809847384,4.83942738090928,5.00895729946347,2.68606835059024,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,3.03985603307473,1.37645568640302,4.01962374880514,0.86152399231815,1.29282739611533,0.380046838912748,0.504060259519861,1.10865255327652,0,0,0,0.577703239502549,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26046957459495,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0.898819408654221,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:66382473..66382485,- | |short_description=p@chr5:66382473..66382485,- | ||
}} | }} |
Latest revision as of 13:10, 4 August 2015
Short description: | p@chr5:66382473..66382485, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:66382473..66382485, - |
Coexpression cluster: | MCL_coexpression_mm9:2313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.49e-37 | 9 |
epithelial cell of alimentary canal | 5.49e-37 | 9 |
brush border epithelial cell | 4.44e-32 | 6 |
gut absorptive cell | 4.44e-32 | 6 |
enterocyte | 4.44e-32 | 6 |
columnar/cuboidal epithelial cell | 1.85e-27 | 7 |
endo-epithelial cell | 7.08e-22 | 15 |
epithelial cell | 6.90e-20 | 25 |
endodermal cell | 3.42e-16 | 20 |
M cell of gut | 8.07e-08 | 3 |
intestinal crypt stem cell | 9.44e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.39e-49 | 15 |
intestinal mucosa | 1.88e-39 | 13 |
wall of intestine | 1.88e-39 | 13 |
gastrointestinal system mucosa | 1.88e-39 | 13 |
epithelium of mucosa | 5.49e-37 | 9 |
gastrointestinal system epithelium | 5.49e-37 | 9 |
intestinal epithelium | 5.49e-37 | 9 |
simple columnar epithelium | 4.00e-30 | 11 |
organ component layer | 4.60e-30 | 24 |
intestine | 4.21e-19 | 31 |
gastrointestinal system | 1.65e-14 | 47 |
gut-associated lymphoid tissue | 2.39e-11 | 2 |
mucosa-associated lymphoid tissue | 2.39e-11 | 2 |
lymphoid tissue | 2.39e-11 | 2 |
digestive system | 3.68e-08 | 116 |
digestive tract | 3.68e-08 | 116 |
primitive gut | 3.68e-08 | 116 |
endoderm-derived structure | 5.52e-08 | 118 |
endoderm | 5.52e-08 | 118 |
presumptive endoderm | 5.52e-08 | 118 |
lymphoid system | 7.46e-08 | 3 |