FFCP PHASE1:Mm9::chr16:10170309..10170320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68172 | |EntrezGene=68172 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2517 | |MCL_coexpression_id=2517 | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQD0,Q505A8 | |UniProt=Q9CQD0,Q505A8 | ||
|association_with_transcript=0bp_to_ENSMUST00000044103,ENSMUST00000121292,NM_026594,uc007yde.1_5end | |association_with_transcript=0bp_to_ENSMUST00000044103,ENSMUST00000121292,NM_026594,uc007yde.1_5end | ||
|cluster_id=chr16:10170309..10170320,+ | |||
|description=CAGE_peak_2_at_Rpl39l_5end | |description=CAGE_peak_2_at_Rpl39l_5end | ||
|id=chr16:10170309..10170320,+ | |id=chr16:10170309..10170320,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.20e-13,3;CL:0002092,1.09e-12,3;CL:0002540,1.09e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.54e-15!15;UBERON:0000473!3.39e-14!14;UBERON:0003101!5.58e-14!16;UBERON:0000079!5.58e-14!16;UBERON:0000991!1.25e-13!18;UBERON:0005564!1.25e-13!18;UBERON:0004176!9.68e-13!17;UBERON:0009196!9.68e-13!17;UBERON:0009117!9.68e-13!17;UBERON:0003133!1.27e-10!24;UBERON:0005156!1.79e-09!26;UBERON:0000990!1.79e-09!26 | |ontology_enrichment_uberon=UBERON:0003135!3.54e-15!15;UBERON:0000473!3.39e-14!14;UBERON:0003101!5.58e-14!16;UBERON:0000079!5.58e-14!16;UBERON:0000991!1.25e-13!18;UBERON:0005564!1.25e-13!18;UBERON:0004176!9.68e-13!17;UBERON:0009196!9.68e-13!17;UBERON:0009117!9.68e-13!17;UBERON:0003133!1.27e-10!24;UBERON:0005156!1.79e-09!26;UBERON:0000990!1.79e-09!26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.02e-28,14;UBERON:0003135,1.05e-26,15;UBERON:0003101,6.05e-25,16;UBERON:0000079,6.05e-25,16;UBERON:0004176,2.16e-23,17;UBERON:0009196,2.16e-23,17;UBERON:0009117,2.16e-23,17;UBERON:0000991,5.21e-22,18;UBERON:0005564,5.21e-22,18;UBERON:0003133,3.92e-16,24;UBERON:0005156,8.94e-15,26;UBERON:0000990,8.94e-15,26;UBERON:0002323,6.33e-10,37;UBERON:0004458,6.33e-10,37;UBERON:0003886,1.27e-09,38;UBERON:0002553,2.45e-09,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,3.656861476496,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0.528990979272033,0,0,0,1.3498495759221,1.97773272513395,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,8.35108580632483,20.7828803682295,10.6001872353102,0,3.84979432242953,2.54805239706646,14.2213340630666,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0.360124259610698,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,4.26230857979356,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4203316699992,0.747582730219894,1.15820943319968,4.083474955225,4.00395452780966,2.19642963138012,1.05621514781179,1.3020438484395,2.83120229949419,8.21386010808421,10.657110231541,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0.532427418478012,0.715308569841963,0,0,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,3.656861476496,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0.528990979272033,0,0,0,1.3498495759221,1.97773272513395,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,8.35108580632483,20.7828803682295,10.6001872353102,0,3.84979432242953,2.54805239706646,14.2213340630666,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0.360124259610698,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,4.26230857979356,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4203316699992,0.747582730219894,1.15820943319968,4.083474955225,4.00395452780966,2.19642963138012,1.05621514781179,1.3020438484395,2.83120229949419,8.21386010808421,10.657110231541,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0.532427418478012,0.715308569841963,0,0,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Rpl39l | |short_description=p2@Rpl39l | ||
}} | }} |
Latest revision as of 14:23, 1 October 2015
Short description: | p2@Rpl39l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rpl39l_5end |
Coexpression cluster: | MCL_coexpression_mm9:2517 |
Association with transcript: | 0bp_to_ENSMUST00000044103, ENSMUST00000121292, NM_026594, uc007yde.1_5end |
EntrezGene: | Rpl39l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.20e-13 | 3 |
bone marrow cell | 1.09e-12 | 3 |
mesenchymal stem cell of the bone marrow | 1.09e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.02e-28 | 14 |
male reproductive organ | 1.05e-26 | 15 |
male organism | 6.05e-25 | 16 |
male reproductive system | 6.05e-25 | 16 |
external genitalia | 2.16e-23 | 17 |
indifferent external genitalia | 2.16e-23 | 17 |
indifferent gonad | 2.16e-23 | 17 |
gonad | 5.21e-22 | 18 |
gonad primordium | 5.21e-22 | 18 |
reproductive organ | 3.92e-16 | 24 |
reproductive structure | 8.94e-15 | 26 |
reproductive system | 8.94e-15 | 26 |
body cavity | 6.33e-10 | 37 |
body cavity or lining | 6.33e-10 | 37 |
body cavity precursor | 1.27e-09 | 38 |
anatomical cavity | 2.45e-09 | 39 |