FFCP PHASE1:Hg19::chr2:162929909..162929932,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:162929909..162929932,+
|short_description=p@chr2:162929909..162929932,+
|description=CAGE_peak_at_chr2:162929909..162929932,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:162929909..162929932,+ | |||
|coexpression_cluster_id=C1265 | |||
|description=CAGE_peak_at_chr2:162929909..162929932,+ | |||
|id=chr2:162929909..162929932,+ | |||
|ontology_enrichment_celltype=CL:0000680!5.67e-10!57;CL:0000056!5.67e-10!57;CL:0000355!5.67e-10!57;CL:0000187!2.99e-08!54;CL:0000192!3.78e-08!42;CL:0000514!3.78e-08!42;CL:0000393!3.16e-07!60;CL:0000211!3.16e-07!60;CL:0002494!4.36e-07!16;CL:0000183!6.81e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000569;5.76e-11;4!CL:0000134;3.51e-08;55!CL:0000048;6.06e-08;58!CL:0000723;1.71e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,7.58e-11,4;CL:0000011,7.58e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000011;5.76e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!3.55e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.04e-18;14!DOID:120;4.27e-09;27!DOID:193;2.21e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.32e-18,14;DOID:120,4.80e-09,27;DOID:193,2.46e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.02e-08!61;UBERON:0002036!1.02e-08!61;UBERON:0003082!1.02e-08!61;UBERON:0002385!3.68e-08!63;UBERON:0001015!3.68e-08!63;UBERON:0000383!3.68e-08!63;UBERON:0004290!9.41e-08!70;UBERON:0004872!1.55e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;5.46e-14;5!UBERON:0000991;5.35e-12;21!UBERON:0000992;2.28e-11;13!UBERON:0001829;1.39e-09;2!UBERON:0005406;1.39e-09;2!UBERON:0001044;3.54e-07;6!UBERON:0003293;3.54e-07;6!UBERON:0003294;3.54e-07;6!UBERON:0010047;3.54e-07;6!UBERON:0003408;3.54e-07;6!UBERON:0000167;3.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,5.14e-14,5;UBERON:0000991,5.96e-12,21;UBERON:0009196,5.96e-12,21;UBERON:0009117,5.96e-12,21;UBERON:0005564,5.96e-12,21;UBERON:0004176,2.37e-11,22;UBERON:0000992,2.83e-11,13;UBERON:0005406,7.52e-10,2;UBERON:0001829,1.40e-09,2;UBERON:0001044,3.37e-07,6;UBERON:0003293,3.37e-07,6;UBERON:0003294,3.37e-07,6;UBERON:0010047,3.37e-07,6;UBERON:0000167,3.37e-07,6 | |||
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| ||
|short_description=p@chr2:162929909..162929932,+ | |||
}} | }} |
Latest revision as of 01:57, 29 July 2015
Short description: | p@chr2:162929909..162929932, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162929909..162929932, + |
Coexpression cluster: | C1265_Fibroblast_Mesothelial_mesenchymal_anaplastic_CD4_Sertoli_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 7.58e-11 | 4 |
migratory trunk neural crest cell | 7.58e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 5.14e-14 | 5 |
gonad | 5.96e-12 | 21 |
indifferent external genitalia | 5.96e-12 | 21 |
indifferent gonad | 5.96e-12 | 21 |
gonad primordium | 5.96e-12 | 21 |
external genitalia | 2.37e-11 | 22 |
female gonad | 2.83e-11 | 13 |
perirenal fat | 7.52e-10 | 2 |
major salivary gland | 1.40e-09 | 2 |
saliva-secreting gland | 3.37e-07 | 6 |
gland of oral region | 3.37e-07 | 6 |
gland of foregut | 3.37e-07 | 6 |
oral gland | 3.37e-07 | 6 |
oral cavity | 3.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.32e-18 | 14 |
female reproductive organ cancer | 4.80e-09 | 27 |
reproductive organ cancer | 2.46e-08 | 29 |