FFCP PHASE1:Mm9::chr11:70468718..70468737,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:70468718..70468737,- | |||
|description=CAGE_peak_at_chr11:70468718..70468737,- | |description=CAGE_peak_at_chr11:70468718..70468737,- | ||
|id=chr11:70468718..70468737,- | |id=chr11:70468718..70468737,- | ||
|ontology_enrichment_celltype=CL:0002563!8.86e-15!9;CL:0002251!8.86e-15!9;CL:0000239!5.60e-11!6;CL:0000677!5.60e-11!6;CL:0000212!5.60e-11!6;CL:0000584!5.60e-11!6;CL:0000075!3.02e-09!7;CL:0000066!4.20e-09!25;CL:0002076!5.53e-08!15;CL:0000223!9.06e-07!20 | |ontology_enrichment_celltype=CL:0002563!8.86e-15!9;CL:0002251!8.86e-15!9;CL:0000239!5.60e-11!6;CL:0000677!5.60e-11!6;CL:0000212!5.60e-11!6;CL:0000584!5.60e-11!6;CL:0000075!3.02e-09!7;CL:0000066!4.20e-09!25;CL:0002076!5.53e-08!15;CL:0000223!9.06e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.03e-24,6;CL:0000677,1.03e-24,6;CL:0000584,1.03e-24,6;CL:0000075,4.01e-21,7;CL:0002563,2.51e-16,9;CL:0002251,2.51e-16,9;CL:0000682,1.99e-13,3;CL:0000066,2.49e-12,25;CL:0002076,1.37e-09,15;CL:0000223,4.69e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.48e-24!15;UBERON:0000160!6.52e-22!43;UBERON:0001242!1.15e-20!13;UBERON:0000060!1.15e-20!13;UBERON:0001262!1.15e-20!13;UBERON:0004786!1.15e-20!13;UBERON:0005409!2.38e-16!59;UBERON:0003350!8.86e-15!9;UBERON:0004808!8.86e-15!9;UBERON:0001277!8.86e-15!9;UBERON:0004923!2.39e-13!24;UBERON:0000485!1.11e-11!11;UBERON:0001007!3.77e-10!128;UBERON:0001555!3.77e-10!128;UBERON:0007026!3.77e-10!128;UBERON:0004119!7.79e-10!130;UBERON:0000925!7.79e-10!130;UBERON:0006595!7.79e-10!130;UBERON:0004921!1.10e-08!126;UBERON:0004185!1.10e-08!126 | |ontology_enrichment_uberon=UBERON:0000344!4.48e-24!15;UBERON:0000160!6.52e-22!43;UBERON:0001242!1.15e-20!13;UBERON:0000060!1.15e-20!13;UBERON:0001262!1.15e-20!13;UBERON:0004786!1.15e-20!13;UBERON:0005409!2.38e-16!59;UBERON:0003350!8.86e-15!9;UBERON:0004808!8.86e-15!9;UBERON:0001277!8.86e-15!9;UBERON:0004923!2.39e-13!24;UBERON:0000485!1.11e-11!11;UBERON:0001007!3.77e-10!128;UBERON:0001555!3.77e-10!128;UBERON:0007026!3.77e-10!128;UBERON:0004119!7.79e-10!130;UBERON:0000925!7.79e-10!130;UBERON:0006595!7.79e-10!130;UBERON:0004921!1.10e-08!126;UBERON:0004185!1.10e-08!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.12e-32,15;UBERON:0000160,1.31e-30,31;UBERON:0001242,2.01e-24,13;UBERON:0001262,2.01e-24,13;UBERON:0004786,2.01e-24,13;UBERON:0004923,2.74e-19,24;UBERON:0005409,2.85e-19,47;UBERON:0003350,2.51e-16,9;UBERON:0004808,2.51e-16,9;UBERON:0001277,2.51e-16,9;UBERON:0000485,2.87e-13,11;UBERON:0001962,7.70e-10,2;UBERON:0001961,7.70e-10,2;UBERON:0001744,7.70e-10,2;UBERON:0002108,2.89e-09,4;UBERON:0001007,2.25e-08,116;UBERON:0001555,2.25e-08,116;UBERON:0007026,2.25e-08,116;UBERON:0004119,3.53e-08,118;UBERON:0000925,3.53e-08,118;UBERON:0006595,3.53e-08,118;UBERON:0002465,8.07e-07,3 | |||
|phase1_expression=0,13.2610654902957,12.2849794635175,10.5862473957391,16.0286633582831,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9992422793407,14.2233754261645,14.3557991028755,7.75371593086335,9.48073423817912,0.950117097281869,3.02436155711917,2.88249663851896,0,0,0,0.577703239502549,0.997407872150954,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,9.25172592354634,3.70230793328962,0,0,0.128867461322093,0,0.22237804384487,0,1.42358718463353,0,0.251335208800269,0.795825888164603,0.19496408711912,5.39291645192533,3.6743468478698,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.114870937911227,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,13.2610654902957,12.2849794635175,10.5862473957391,16.0286633582831,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9992422793407,14.2233754261645,14.3557991028755,7.75371593086335,9.48073423817912,0.950117097281869,3.02436155711917,2.88249663851896,0,0,0,0.577703239502549,0.997407872150954,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,9.25172592354634,3.70230793328962,0,0,0.128867461322093,0,0.22237804384487,0,1.42358718463353,0,0.251335208800269,0.795825888164603,0.19496408711912,5.39291645192533,3.6743468478698,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.114870937911227,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:70468718..70468737,- | |short_description=p@chr11:70468718..70468737,- | ||
}} | }} |
Latest revision as of 21:38, 3 August 2015
Short description: | p@chr11:70468718..70468737, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70468718..70468737, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.03e-24 | 6 |
gut absorptive cell | 1.03e-24 | 6 |
enterocyte | 1.03e-24 | 6 |
columnar/cuboidal epithelial cell | 4.01e-21 | 7 |
intestinal epithelial cell | 2.51e-16 | 9 |
epithelial cell of alimentary canal | 2.51e-16 | 9 |
M cell of gut | 1.99e-13 | 3 |
epithelial cell | 2.49e-12 | 25 |
endo-epithelial cell | 1.37e-09 | 15 |
endodermal cell | 4.69e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.12e-32 | 15 |
intestine | 1.31e-30 | 31 |
intestinal mucosa | 2.01e-24 | 13 |
wall of intestine | 2.01e-24 | 13 |
gastrointestinal system mucosa | 2.01e-24 | 13 |
organ component layer | 2.74e-19 | 24 |
gastrointestinal system | 2.85e-19 | 47 |
epithelium of mucosa | 2.51e-16 | 9 |
gastrointestinal system epithelium | 2.51e-16 | 9 |
intestinal epithelium | 2.51e-16 | 9 |
simple columnar epithelium | 2.87e-13 | 11 |
gut-associated lymphoid tissue | 7.70e-10 | 2 |
mucosa-associated lymphoid tissue | 7.70e-10 | 2 |
lymphoid tissue | 7.70e-10 | 2 |
small intestine | 2.89e-09 | 4 |
digestive system | 2.25e-08 | 116 |
digestive tract | 2.25e-08 | 116 |
primitive gut | 2.25e-08 | 116 |
endoderm-derived structure | 3.53e-08 | 118 |
endoderm | 3.53e-08 | 118 |
presumptive endoderm | 3.53e-08 | 118 |
lymphoid system | 8.07e-07 | 3 |