FFCP PHASE1:Hg19::chr2:20403881..20403902,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:20403881..20403902,-
|short_description=p@chr2:20403881..20403902,-
|description=CAGE_peak_at_chr2:20403881..20403902,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:20403881..20403902,- | |||
|coexpression_cluster_id=C1889 | |||
|description=CAGE_peak_at_chr2:20403881..20403902,- | |||
|id=chr2:20403881..20403902,- | |||
|ontology_enrichment_celltype=CL:0000066!8.31e-23!254;CL:0002076!8.73e-18!43;CL:0000223!3.57e-14!59;CL:0000220!3.48e-11!246;CL:0002321!4.75e-11!248;CL:0002368!1.02e-09!13;CL:0002077!1.90e-07!33;CL:0002159!2.45e-07!13;CL:0002202!5.42e-07!9;CL:0002632!5.42e-07!9;CL:0000221!7.00e-07!71;CL:0002251!7.14e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.82e-18;42!CL:0002368;9.98e-17;13!CL:0002159;1.19e-13;14!CL:0002202;2.13e-10;9!CL:0002632;2.13e-10;9!CL:0000244;4.51e-09;4!CL:0000731;4.51e-09;4!CL:0002328;2.56e-07;3!CL:0002166;3.37e-07;3!CL:0002621;3.68e-07;3!CL:0000622;6.91e-07;5!CL:0000307;8.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.26e-23,42;CL:0000223,3.49e-19,58;CL:0002368,1.03e-16,13;CL:0000066,2.40e-15,253;CL:0002159,1.22e-13,14;CL:0002202,2.40e-10,9;CL:0002632,2.40e-10,9;CL:0000244,4.29e-09,4;CL:0000731,4.29e-09,4;CL:0002328,2.50e-07,3;CL:0002077,2.52e-07,34;CL:0002166,2.94e-07,3;CL:0002621,3.98e-07,3;CL:0002321,6.23e-07,250;CL:0000622,7.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;6.83e-11;58!CL:0000377;8.13e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.48e-09!106;DOID:0050687!6.23e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.49e-19!169;UBERON:0000925!6.49e-19!169;UBERON:0006595!6.49e-19!169;UBERON:0001007!5.45e-13!155;UBERON:0001555!5.45e-13!155;UBERON:0007026!5.45e-13!155;UBERON:0001004!5.41e-12!72;UBERON:0003102!1.57e-11!95;UBERON:0005911!3.13e-10!82;UBERON:0004921!1.19e-09!129;UBERON:0004185!1.19e-09!129;UBERON:0000077!1.45e-09!130;UBERON:0000065!4.05e-09!53;UBERON:0000161!2.10e-08!35;UBERON:0000475!2.22e-08!365;UBERON:0003104!3.14e-08!238;UBERON:0009142!3.14e-08!238;UBERON:0005153!4.52e-08!37;UBERON:0006554!2.18e-07!44;UBERON:0005156!3.16e-07!59;UBERON:0000990!3.16e-07!59;UBERON:0003100!4.80e-07!41;UBERON:0002100!5.11e-07!216;UBERON:0001008!5.52e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.70e-08;12!UBERON:0010371;1.53e-07;31!UBERON:0001003;2.10e-07;15!UBERON:0007376;2.10e-07;15!UBERON:0004815;2.56e-07;3!UBERON:0002031;2.56e-07;3!UBERON:0002365;2.79e-07;31!UBERON:0002330;2.79e-07;31!UBERON:0000165;3.26e-07;28!UBERON:0000365;3.27e-07;5!UBERON:0001949;3.68e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.60e-14,99;UBERON:0004119,1.47e-12,160;UBERON:0000925,1.47e-12,160;UBERON:0006595,1.47e-12,160;UBERON:0000033,1.66e-08,56;UBERON:0000153,4.17e-08,62;UBERON:0007811,4.17e-08,62;UBERON:0001004,1.16e-07,74;UBERON:0002365,1.84e-07,31;UBERON:0002330,1.84e-07,31;UBERON:0001003,1.98e-07,15;UBERON:0007376,1.98e-07,15;UBERON:0007383,1.98e-07,15;UBERON:0004815,2.50e-07,3;UBERON:0002031,2.50e-07,3;UBERON:0000365,3.14e-07,5;UBERON:0001949,3.98e-07,3;UBERON:0000165,6.55e-07,29;UBERON:0000930,6.55e-07,29;UBERON:0000166,7.10e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,4.88460817580699,1.09220686065086,2.37390280405608,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0.975865597581014,0.369363174230364,0.612002073732759,0,0.572471974262113,0.821246550437305,0.376627918784408,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0,4.59710612239464,9.638589400904,10.3531122846701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.973269740605272,0.472674085820339,0.443458794925128,0.175669571386252,0.72038491523742,14.2075162434091,10.0111799551796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,7.84969293856562,0,0,0,0.286836620748814,1.41867352879343,0,1.06748995729705,0.49333509683432,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0,1.22595118319608,0.150238058906597,0,1.07633781413317,0,0.423863802319124,1.20036438433761,0.721367704669072,0.257640540045629,0.558350568994769,1.68776332241266,0.974370051611986,0,0.0920498986422993,0.969876340912871,0.355009592516614,0.302256294682921,0.508681776931463,7.53717327336858,6.00041465299836,4.58887352622406,0,0.132529768321485,0.116193942869518,0.414644220061482,0.504641701751257,0.36497735907583,1.56449532329816,5.14592750554308,2.76269842704961,0,0,0.354920400119532,0.842923450390509,0.723033089650446,0.220587945464788,0.653638332277218,0.237270619111097,0,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,7.60530208930985,0,0.590789906681404,0,0.983907508344908,0.171567810298526,18.5477982340577,3.37205259772859,10.0528972411631,4.62942225792648,0,0,1.44331342025273,0.115930404975077,0,0,0,0,2.37061319387782,0.858486162094873,0,0.468008530278475,0,12.185398418281,7.8951600253464,3.96970272278682,2.23896306757121,13.3691611716422,6.9008882249738,0,0,0,0,0,0,0,0,1.71072446022705,0,0.300343057843917,0,1.23344192779897,0,0.66004457238855,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.60818530127658,0.783204629850962,0.343143423810856,0,0,0,0.909382714338778,9.98612637062982,1.81434175997808,0,0.306923946576125,0.280660094433074,0.640695746278505,0,0,0,1.3878872442239,3.37367278094941,1.8067974323038,1.55776328755086,3.60252173225874,0.241718899183244,15.0379852727464,20.6261415216408,0.34444334449382,0,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0.633309773357254,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.895499018888713,0,0,0,0,0,1.854738209659,0.0915694648183434,0,2.29706215198469,6.50060246036521,0,0.290012154876366,0.154048617114644,0.307007349452259,0,0.107420244868274,0.145016693914229,0.426133137080504,0,9.25595526021477,4.22818148203234,1.53135254993501,2.93357564481095,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.471249609382746,0.404364963146632,0,0.421258456238981,0,0,0,0.272999822815972,0.282810863907425,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0.329294892959902,0.379473173765715,1.04980416073495,4.04132873447151,3.35151137767894,3.26672954583968,1.88287601553558,9.90162357143829,6.73885902670502,10.1988935313435,3.67557440331135,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0.568272293612826,0.71623345421307,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0.369254416383208,0,0.0898683511473268,1.61119057208048,0,1.67693789582787,0,0,0,0,0,0.260427761085233,0.437299999980979,0.724999575434793,2.16207551742449,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,2.64905114129346,0.769502585037971,0.113942055847001,0.23056390438806,0.448788222048861,0.217294743844016,0.31900115973192,0.824378340616761,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0.216388639742091,0.995261931078505,0.442287822516696,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0.569219092059585,0,3.29763502836749,0.489961987071888,0.69647365264322,0.52418000472609,0.51595809741485,0.0967563312890851,0.0730893170861856,0.164230914106418,3.9765496760252,0.0882561266915003,0.451961481561065,0.822251547880505,0.794858446811959,0,1.75996244461323,0.721429382263803,2.34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| ||
|short_description=p@chr2:20403881..20403902,- | |||
}} | }} |
Latest revision as of 05:13, 29 July 2015
Short description: | p@chr2:20403881..20403902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20403881..20403902, - |
Coexpression cluster: | C1889_Prostate_Keratinocyte_Bronchial_Urothelial_Small_Corneal_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.26e-23 | 42 |
endodermal cell | 3.49e-19 | 58 |
respiratory epithelial cell | 1.03e-16 | 13 |
epithelial cell | 2.40e-15 | 253 |
general ecto-epithelial cell | 1.22e-13 | 14 |
epithelial cell of tracheobronchial tree | 2.40e-10 | 9 |
epithelial cell of lower respiratory tract | 2.40e-10 | 9 |
transitional epithelial cell | 4.29e-09 | 4 |
urothelial cell | 4.29e-09 | 4 |
bronchial epithelial cell | 2.50e-07 | 3 |
ecto-epithelial cell | 2.52e-07 | 34 |
epithelial cell of Malassez | 2.94e-07 | 3 |
gingival epithelial cell | 3.98e-07 | 3 |
embryonic cell | 6.23e-07 | 250 |
acinar cell | 7.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.60e-14 | 99 |
endoderm-derived structure | 1.47e-12 | 160 |
endoderm | 1.47e-12 | 160 |
presumptive endoderm | 1.47e-12 | 160 |
head | 1.66e-08 | 56 |
anterior region of body | 4.17e-08 | 62 |
craniocervical region | 4.17e-08 | 62 |
respiratory system | 1.16e-07 | 74 |
exocrine gland | 1.84e-07 | 31 |
exocrine system | 1.84e-07 | 31 |
skin epidermis | 1.98e-07 | 15 |
outer epithelium | 1.98e-07 | 15 |
enveloping layer of ectoderm | 1.98e-07 | 15 |
lower respiratory tract epithelium | 2.50e-07 | 3 |
epithelium of bronchus | 2.50e-07 | 3 |
urothelium | 3.14e-07 | 5 |
gingival epithelium | 3.98e-07 | 3 |
mouth | 6.55e-07 | 29 |
stomodeum | 6.55e-07 | 29 |
oral opening | 7.10e-07 | 22 |