FFCP PHASE1:Mm9::chr11:78734321..78734336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18126 | |EntrezGene=18126 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |MCL_coexpression_id=219 | ||
|TSSclassifier=NA | |||
|UniProt=P29477 | |UniProt=P29477 | ||
|association_with_transcript=-24bp_to_NM_010927,uc007kkc.1_5end | |association_with_transcript=-24bp_to_NM_010927,uc007kkc.1_5end | ||
|cluster_id=chr11:78734321..78734336,+ | |||
|description=CAGE_peak_1_at_Nos2_5end | |description=CAGE_peak_1_at_Nos2_5end | ||
|id=chr11:78734321..78734336,+ | |id=chr11:78734321..78734336,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.61e-12!9;CL:0002251!1.61e-12!9;CL:0000239!3.47e-09!6;CL:0000677!3.47e-09!6;CL:0000212!3.47e-09!6;CL:0000584!3.47e-09!6;CL:0000075!1.11e-07!7 | |ontology_enrichment_celltype=CL:0002563!1.61e-12!9;CL:0002251!1.61e-12!9;CL:0000239!3.47e-09!6;CL:0000677!3.47e-09!6;CL:0000212!3.47e-09!6;CL:0000584!3.47e-09!6;CL:0000075!1.11e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.68e-19,9;CL:0002251,2.68e-19,9;CL:0000239,6.67e-14,6;CL:0000677,6.67e-14,6;CL:0000584,6.67e-14,6;CL:0000075,8.67e-12,7;CL:0000066,6.73e-11,25;CL:0002076,8.28e-11,15;CL:0000682,3.81e-08,3;CL:0000473,4.67e-08,7;CL:0000223,1.21e-07,20;CL:0002250,5.59e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.91e-20!15;UBERON:0001242!1.23e-17!13;UBERON:0000060!1.23e-17!13;UBERON:0001262!1.23e-17!13;UBERON:0004786!1.23e-17!13;UBERON:0004923!7.68e-17!24;UBERON:0003350!1.61e-12!9;UBERON:0004808!1.61e-12!9;UBERON:0001277!1.61e-12!9;UBERON:0000160!2.38e-10!43;UBERON:0000485!9.09e-10!11;UBERON:0004119!4.26e-09!130;UBERON:0000925!4.26e-09!130;UBERON:0006595!4.26e-09!130;UBERON:0005409!2.27e-08!59;UBERON:0001007!3.61e-08!128;UBERON:0001555!3.61e-08!128;UBERON:0007026!3.61e-08!128;UBERON:0000064!3.35e-07!99;UBERON:0000490!3.95e-07!66;UBERON:0004921!4.55e-07!126;UBERON:0004185!4.55e-07!126;UBERON:0003929!6.45e-07!55 | |ontology_enrichment_uberon=UBERON:0000344!3.91e-20!15;UBERON:0001242!1.23e-17!13;UBERON:0000060!1.23e-17!13;UBERON:0001262!1.23e-17!13;UBERON:0004786!1.23e-17!13;UBERON:0004923!7.68e-17!24;UBERON:0003350!1.61e-12!9;UBERON:0004808!1.61e-12!9;UBERON:0001277!1.61e-12!9;UBERON:0000160!2.38e-10!43;UBERON:0000485!9.09e-10!11;UBERON:0004119!4.26e-09!130;UBERON:0000925!4.26e-09!130;UBERON:0006595!4.26e-09!130;UBERON:0005409!2.27e-08!59;UBERON:0001007!3.61e-08!128;UBERON:0001555!3.61e-08!128;UBERON:0007026!3.61e-08!128;UBERON:0000064!3.35e-07!99;UBERON:0000490!3.95e-07!66;UBERON:0004921!4.55e-07!126;UBERON:0004185!4.55e-07!126;UBERON:0003929!6.45e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.15e-31,15;UBERON:0001242,1.32e-27,13;UBERON:0001262,1.32e-27,13;UBERON:0004786,1.32e-27,13;UBERON:0000160,2.30e-24,31;UBERON:0004923,9.75e-21,24;UBERON:0003350,2.68e-19,9;UBERON:0004808,2.68e-19,9;UBERON:0001277,2.68e-19,9;UBERON:0000485,1.95e-15,11;UBERON:0005409,2.71e-14,47;UBERON:0004119,2.59e-10,118;UBERON:0000925,2.59e-10,118;UBERON:0006595,2.59e-10,118;UBERON:0002108,8.77e-10,4;UBERON:0001007,9.95e-10,116;UBERON:0001555,9.95e-10,116;UBERON:0007026,9.95e-10,116;UBERON:0004921,3.83e-08,114;UBERON:0000331,5.47e-08,3;UBERON:0002116,5.47e-08,3;UBERON:0001204,5.47e-08,3;UBERON:0001168,5.47e-08,3;UBERON:0003929,4.43e-07,55 | |||
|phase1_expression=0,348.975407639361,236.599604482559,34.1784558776718,19.0340377379612,78.0638614390288,89.0064160668953,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,34.0783860549956,43.5877634027623,265.869399385254,379.070556619986,234.648172394933,190.403466295287,100.307991644452,317.518091258396,0,0,0,17.3310971850765,5.31950865147176,4.08338712524738,0.418531630736908,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,7.87868770061514,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0,66.6742914094423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,5.61711931072457,3.43785736662608,0,0,0,0,0,0,38.91138304665,0,0,0.596869416123452,0,32.357498711552,1.08069024937347,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,1.50791283939272,15.2293591469239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97964147567043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.48282449604674,0,0,0,0,0.119372344003136,0,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,2.16351809135944,1.03382669022204,1.31256384932592,0.914481679859998,1.71404514732629,3.50848370663109,2.50150788264857,2.68816875017609,0,0.887943813496259,1.07656627931371,1.00730769818447,0,0.93841237725591,2.38097111547445,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,348.975407639361,236.599604482559,34.1784558776718,19.0340377379612,78.0638614390288,89.0064160668953,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,34.0783860549956,43.5877634027623,265.869399385254,379.070556619986,234.648172394933,190.403466295287,100.307991644452,317.518091258396,0,0,0,17.3310971850765,5.31950865147176,4.08338712524738,0.418531630736908,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,7.87868770061514,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0,66.6742914094423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,5.61711931072457,3.43785736662608,0,0,0,0,0,0,38.91138304665,0,0,0.596869416123452,0,32.357498711552,1.08069024937347,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,1.50791283939272,15.2293591469239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97964147567043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.48282449604674,0,0,0,0,0.119372344003136,0,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,2.16351809135944,1.03382669022204,1.31256384932592,0.914481679859998,1.71404514732629,3.50848370663109,2.50150788264857,2.68816875017609,0,0.887943813496259,1.07656627931371,1.00730769818447,0,0.93841237725591,2.38097111547445,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Nos2 | |short_description=p1@Nos2 | ||
}} | }} |
Latest revision as of 18:18, 25 September 2015
Short description: | p1@Nos2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nos2_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | -24bp_to_NM_010927, uc007kkc.1_5end |
EntrezGene: | Nos2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.68e-19 | 9 |
epithelial cell of alimentary canal | 2.68e-19 | 9 |
brush border epithelial cell | 6.67e-14 | 6 |
gut absorptive cell | 6.67e-14 | 6 |
enterocyte | 6.67e-14 | 6 |
columnar/cuboidal epithelial cell | 8.67e-12 | 7 |
epithelial cell | 6.73e-11 | 25 |
endo-epithelial cell | 8.28e-11 | 15 |
M cell of gut | 3.81e-08 | 3 |
defensive cell | 4.67e-08 | 7 |
endodermal cell | 1.21e-07 | 20 |
intestinal crypt stem cell | 5.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.15e-31 | 15 |
intestinal mucosa | 1.32e-27 | 13 |
wall of intestine | 1.32e-27 | 13 |
gastrointestinal system mucosa | 1.32e-27 | 13 |
intestine | 2.30e-24 | 31 |
organ component layer | 9.75e-21 | 24 |
epithelium of mucosa | 2.68e-19 | 9 |
gastrointestinal system epithelium | 2.68e-19 | 9 |
intestinal epithelium | 2.68e-19 | 9 |
simple columnar epithelium | 1.95e-15 | 11 |
gastrointestinal system | 2.71e-14 | 47 |
endoderm-derived structure | 2.59e-10 | 118 |
endoderm | 2.59e-10 | 118 |
presumptive endoderm | 2.59e-10 | 118 |
small intestine | 8.77e-10 | 4 |
digestive system | 9.95e-10 | 116 |
digestive tract | 9.95e-10 | 116 |
primitive gut | 9.95e-10 | 116 |
subdivision of digestive tract | 3.83e-08 | 114 |
ileal mucosa | 5.47e-08 | 3 |
ileum | 5.47e-08 | 3 |
mucosa of small intestine | 5.47e-08 | 3 |
wall of small intestine | 5.47e-08 | 3 |
gut epithelium | 4.43e-07 | 55 |