FFCP PHASE1:Mm9::chr1:72895789..72895808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |MCL_coexpression_id=336 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72895789..72895808,+ | |||
|description=CAGE_peak_at_chr1:72895789..72895808,+ | |description=CAGE_peak_at_chr1:72895789..72895808,+ | ||
|id=chr1:72895789..72895808,+ | |id=chr1:72895789..72895808,+ | ||
|ontology_enrichment_celltype=CL:0002453!1.51e-08!8 | |ontology_enrichment_celltype=CL:0002453!1.51e-08!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.77e-29,8;CL:0000333,1.88e-23,10;CL:0000095,1.88e-23,10;CL:0000243,1.88e-23,10;CL:0000123,1.88e-23,10;CL:0000125,1.88e-23,10;CL:0000030,1.88e-23,10;CL:0000339,1.88e-23,10;CL:0000128,1.24e-20,6;CL:0000126,1.24e-20,6;CL:0000127,1.24e-20,6;CL:0002605,3.40e-11,2;CL:0002604,3.40e-11,2;CL:0002603,5.96e-11,2;CL:0000219,7.82e-11,54;CL:0000878,1.29e-10,2;CL:0000129,1.29e-10,2;CL:0000182,1.86e-08,5;CL:0000151,3.14e-07,3;CL:0000499,3.14e-07,3;CL:0000327,3.14e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.21e-10!22;UBERON:0007499!3.21e-10!22;UBERON:0006925!3.21e-10!22;UBERON:0009497!3.21e-10!22;UBERON:0000015!3.21e-10!22;UBERON:0002423!3.21e-10!22;UBERON:0006235!3.21e-10!22;UBERON:0008835!3.21e-10!22;UBERON:0003894!3.21e-10!22;UBERON:0004161!3.21e-10!22;UBERON:0008836!3.21e-10!22;UBERON:0009854!1.46e-09!23;UBERON:0009856!1.46e-09!23;UBERON:0002365!2.04e-08!25;UBERON:0002330!2.04e-08!25;UBERON:0004111!5.26e-08!122;UBERON:0000025!8.73e-07!114 | |ontology_enrichment_uberon=UBERON:0002107!3.21e-10!22;UBERON:0007499!3.21e-10!22;UBERON:0006925!3.21e-10!22;UBERON:0009497!3.21e-10!22;UBERON:0000015!3.21e-10!22;UBERON:0002423!3.21e-10!22;UBERON:0006235!3.21e-10!22;UBERON:0008835!3.21e-10!22;UBERON:0003894!3.21e-10!22;UBERON:0004161!3.21e-10!22;UBERON:0008836!3.21e-10!22;UBERON:0009854!1.46e-09!23;UBERON:0009856!1.46e-09!23;UBERON:0002365!2.04e-08!25;UBERON:0002330!2.04e-08!25;UBERON:0004111!5.26e-08!122;UBERON:0000025!8.73e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.52e-23,22;UBERON:0007499,1.52e-23,22;UBERON:0006925,1.52e-23,22;UBERON:0009497,1.52e-23,22;UBERON:0000015,1.52e-23,22;UBERON:0002423,1.52e-23,22;UBERON:0006235,1.52e-23,22;UBERON:0008835,1.52e-23,22;UBERON:0003894,1.52e-23,22;UBERON:0004161,1.52e-23,22;UBERON:0008836,1.52e-23,22;UBERON:0009854,1.88e-22,23;UBERON:0009856,1.88e-22,23;UBERON:0002365,1.57e-20,25;UBERON:0002330,1.57e-20,25;UBERON:0005256,1.09e-10,45;UBERON:0003914,3.67e-10,47;UBERON:0005172,1.11e-09,49;UBERON:0005173,1.11e-09,49;UBERON:0002417,1.11e-09,49;UBERON:0000916,1.11e-09,49;UBERON:0003929,1.93e-08,55;UBERON:0002368,1.34e-07,60;UBERON:0003104,1.90e-07,61;UBERON:0009142,1.90e-07,61;UBERON:0000025,5.81e-07,114;UBERON:0002530,6.93e-07,65;UBERON:0000490,9.34e-07,66;UBERON:0009569,9.34e-07,66 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,9.59310688073965,12.9614847813338,22.9427280907654,2.09979632438044,0,0,0,0,0,0,0,0,0.528990979272033,0,0.677689064138264,1.77858959222228,0,0,0,3.89480143673926,4.2264013585371,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0,0,0,0,4.30211938490693,0.679971333707751,1.61910957491345,1.29955283489534,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,3.08056930872567,1.37280706594041,7.18841032636773,2.97712758134803,1.87222603868736,1.76805214562978,0.179397413521912,1.4473305640901,0.554259570499814,0,0.325929952884052,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.822745103010605,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0.167884616364078,0.579568782096571,0,0,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,9.59310688073965,12.9614847813338,22.9427280907654,2.09979632438044,0,0,0,0,0,0,0,0,0.528990979272033,0,0.677689064138264,1.77858959222228,0,0,0,3.89480143673926,4.2264013585371,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0,0,0,0,4.30211938490693,0.679971333707751,1.61910957491345,1.29955283489534,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,3.08056930872567,1.37280706594041,7.18841032636773,2.97712758134803,1.87222603868736,1.76805214562978,0.179397413521912,1.4473305640901,0.554259570499814,0,0.325929952884052,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.822745103010605,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0.167884616364078,0.579568782096571,0,0,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:72895789..72895808,+ | |short_description=p@chr1:72895789..72895808,+ | ||
}} | }} |
Latest revision as of 23:17, 5 August 2015
Short description: | p@chr1:72895789..72895808, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895789..72895808, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.77e-29 | 8 |
migratory neural crest cell | 1.88e-23 | 10 |
neuron associated cell | 1.88e-23 | 10 |
glial cell (sensu Vertebrata) | 1.88e-23 | 10 |
neuron associated cell (sensu Vertebrata) | 1.88e-23 | 10 |
glial cell | 1.88e-23 | 10 |
glioblast | 1.88e-23 | 10 |
glioblast (sensu Vertebrata) | 1.88e-23 | 10 |
oligodendrocyte | 1.24e-20 | 6 |
macroglial cell | 1.24e-20 | 6 |
astrocyte | 1.24e-20 | 6 |
astrocyte of the cerebral cortex | 3.40e-11 | 2 |
astrocyte of the hippocampus | 3.40e-11 | 2 |
astrocyte of the cerebellum | 5.96e-11 | 2 |
motile cell | 7.82e-11 | 54 |
central nervous system macrophage | 1.29e-10 | 2 |
microglial cell | 1.29e-10 | 2 |
hepatocyte | 1.86e-08 | 5 |
secretory cell | 3.14e-07 | 3 |
stromal cell | 3.14e-07 | 3 |
extracellular matrix secreting cell | 3.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.52e-23 | 22 |
epithelial sac | 1.52e-23 | 22 |
digestive gland | 1.52e-23 | 22 |
epithelium of foregut-midgut junction | 1.52e-23 | 22 |
anatomical boundary | 1.52e-23 | 22 |
hepatobiliary system | 1.52e-23 | 22 |
foregut-midgut junction | 1.52e-23 | 22 |
hepatic diverticulum | 1.52e-23 | 22 |
liver primordium | 1.52e-23 | 22 |
septum transversum | 1.52e-23 | 22 |
liver bud | 1.52e-23 | 22 |
digestive tract diverticulum | 1.88e-22 | 23 |
sac | 1.88e-22 | 23 |
exocrine gland | 1.57e-20 | 25 |
exocrine system | 1.57e-20 | 25 |
trunk mesenchyme | 1.09e-10 | 45 |
epithelial tube | 3.67e-10 | 47 |
abdomen element | 1.11e-09 | 49 |
abdominal segment element | 1.11e-09 | 49 |
abdominal segment of trunk | 1.11e-09 | 49 |
abdomen | 1.11e-09 | 49 |
gut epithelium | 1.93e-08 | 55 |
endocrine gland | 1.34e-07 | 60 |
mesenchyme | 1.90e-07 | 61 |
entire embryonic mesenchyme | 1.90e-07 | 61 |
tube | 5.81e-07 | 114 |
gland | 6.93e-07 | 65 |
unilaminar epithelium | 9.34e-07 | 66 |
subdivision of trunk | 9.34e-07 | 66 |