FFCP PHASE1:Mm9::chr11:44332019..44332038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74315 | |EntrezGene=74315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |MCL_coexpression_id=126 | ||
|TSSclassifier=NA | |||
|UniProt=Q5SWK7 | |UniProt=Q5SWK7 | ||
|association_with_transcript=-427bp_to_ENSMUST00000019333,NM_028862,uc007inh.2_5end | |association_with_transcript=-427bp_to_ENSMUST00000019333,NM_028862,uc007inh.2_5end | ||
|cluster_id=chr11:44332019..44332038,+ | |||
|description=CAGE_peak_9_at_Rnf145_5end | |description=CAGE_peak_9_at_Rnf145_5end | ||
|id=chr11:44332019..44332038,+ | |id=chr11:44332019..44332038,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.20e-08!9;CL:0002251!2.20e-08!9 | |ontology_enrichment_celltype=CL:0002563!2.20e-08!9;CL:0002251!2.20e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.04e-12,9;CL:0002251,6.04e-12,9;CL:0002250,2.11e-10,3;CL:0002076,6.57e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.00e-22!59;UBERON:0000160!1.34e-21!43;UBERON:0000344!2.33e-14!15;UBERON:0004119!3.60e-14!130;UBERON:0000925!3.60e-14!130;UBERON:0006595!3.60e-14!130;UBERON:0001007!6.34e-14!128;UBERON:0001555!6.34e-14!128;UBERON:0007026!6.34e-14!128;UBERON:0004921!1.26e-12!126;UBERON:0004185!1.26e-12!126;UBERON:0001242!1.97e-12!13;UBERON:0000060!1.97e-12!13;UBERON:0001262!1.97e-12!13;UBERON:0004786!1.97e-12!13;UBERON:0004923!1.54e-09!24;UBERON:0003350!2.20e-08!9;UBERON:0004808!2.20e-08!9;UBERON:0001277!2.20e-08!9 | |ontology_enrichment_uberon=UBERON:0005409!9.00e-22!59;UBERON:0000160!1.34e-21!43;UBERON:0000344!2.33e-14!15;UBERON:0004119!3.60e-14!130;UBERON:0000925!3.60e-14!130;UBERON:0006595!3.60e-14!130;UBERON:0001007!6.34e-14!128;UBERON:0001555!6.34e-14!128;UBERON:0007026!6.34e-14!128;UBERON:0004921!1.26e-12!126;UBERON:0004185!1.26e-12!126;UBERON:0001242!1.97e-12!13;UBERON:0000060!1.97e-12!13;UBERON:0001262!1.97e-12!13;UBERON:0004786!1.97e-12!13;UBERON:0004923!1.54e-09!24;UBERON:0003350!2.20e-08!9;UBERON:0004808!2.20e-08!9;UBERON:0001277!2.20e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.90e-36,31;UBERON:0005409,9.85e-25,47;UBERON:0000344,8.48e-23,15;UBERON:0001242,3.16e-18,13;UBERON:0001262,3.16e-18,13;UBERON:0004786,3.16e-18,13;UBERON:0004923,1.90e-13,24;UBERON:0002108,1.11e-12,4;UBERON:0003350,6.04e-12,9;UBERON:0004808,6.04e-12,9;UBERON:0001277,6.04e-12,9;UBERON:0001007,1.20e-11,116;UBERON:0001555,1.20e-11,116;UBERON:0007026,1.20e-11,116;UBERON:0004119,2.30e-11,118;UBERON:0000925,2.30e-11,118;UBERON:0006595,2.30e-11,118;UBERON:0000331,2.26e-10,3;UBERON:0002116,2.26e-10,3;UBERON:0001204,2.26e-10,3;UBERON:0001168,2.26e-10,3;UBERON:0004921,1.04e-09,114;UBERON:0000485,1.17e-09,11;UBERON:0001155,2.06e-07,2;UBERON:0000059,2.06e-07,2 | |||
|phase1_expression=0,0,0.909998478779072,1.51232105653415,2.50447864973174,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.27993938234725,1.14704640533585,0,0.430761996159075,0.215471232685889,11.0213583284697,4.03248207615889,1.55211357458713,0,0,0,4.91047753577167,2.1610503896604,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0.696710015581316,1.67527699718721,1.4117846723634,0.444756087689741,1.71203063501303,2.37264530772256,0.494096864172033,0.251335208800269,0.994782360205754,1.16978452271472,4.49409704327111,2.37751854862164,2.38969527905241,0,0.114248512609729,0,1.01825663922657,0.775809948670503,0.98190147846446,1.26473074248515,2.21415221969403,2.511979645462,2.34454611451421,1.48226313543574,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,2.87536413054709,0,0.936113019343682,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.269728692769641,0.165306911450672,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0.909998478779072,1.51232105653415,2.50447864973174,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.27993938234725,1.14704640533585,0,0.430761996159075,0.215471232685889,11.0213583284697,4.03248207615889,1.55211357458713,0,0,0,4.91047753577167,2.1610503896604,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0.696710015581316,1.67527699718721,1.4117846723634,0.444756087689741,1.71203063501303,2.37264530772256,0.494096864172033,0.251335208800269,0.994782360205754,1.16978452271472,4.49409704327111,2.37751854862164,2.38969527905241,0,0.114248512609729,0,1.01825663922657,0.775809948670503,0.98190147846446,1.26473074248515,2.21415221969403,2.511979645462,2.34454611451421,1.48226313543574,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,2.87536413054709,0,0.936113019343682,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.269728692769641,0.165306911450672,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p9@Rnf145 | |short_description=p9@Rnf145 | ||
}} | }} |
Latest revision as of 12:54, 1 October 2015
Short description: | p9@Rnf145 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Rnf145_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -427bp_to_ENSMUST00000019333, NM_028862, uc007inh.2_5end |
EntrezGene: | Rnf145 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.04e-12 | 9 |
epithelial cell of alimentary canal | 6.04e-12 | 9 |
intestinal crypt stem cell | 2.11e-10 | 3 |
endo-epithelial cell | 6.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.90e-36 | 31 |
gastrointestinal system | 9.85e-25 | 47 |
mucosa | 8.48e-23 | 15 |
intestinal mucosa | 3.16e-18 | 13 |
wall of intestine | 3.16e-18 | 13 |
gastrointestinal system mucosa | 3.16e-18 | 13 |
organ component layer | 1.90e-13 | 24 |
small intestine | 1.11e-12 | 4 |
epithelium of mucosa | 6.04e-12 | 9 |
gastrointestinal system epithelium | 6.04e-12 | 9 |
intestinal epithelium | 6.04e-12 | 9 |
digestive system | 1.20e-11 | 116 |
digestive tract | 1.20e-11 | 116 |
primitive gut | 1.20e-11 | 116 |
endoderm-derived structure | 2.30e-11 | 118 |
endoderm | 2.30e-11 | 118 |
presumptive endoderm | 2.30e-11 | 118 |
ileal mucosa | 2.26e-10 | 3 |
ileum | 2.26e-10 | 3 |
mucosa of small intestine | 2.26e-10 | 3 |
wall of small intestine | 2.26e-10 | 3 |
subdivision of digestive tract | 1.04e-09 | 114 |
simple columnar epithelium | 1.17e-09 | 11 |
colon | 2.06e-07 | 2 |
large intestine | 2.06e-07 | 2 |