FFCP PHASE1:Hg19::chr2:48010312..48010328,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:48010312..48010328,+
|short_description=p2@MSH6
|description=CAGE_peak_2_at_MSH6_5end
|association_with_transcript=0bp_to_ENST00000540021,uc010yoi.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2956 | |EntrezGene=2956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7329 | |HGNC=7329 | ||
|TSSclassifier=strong | |||
|UniProt=B4DF41 | |UniProt=B4DF41 | ||
|association_with_transcript=0bp_to_ENST00000540021,uc010yoi.1_5end | |||
|cluster_id=chr2:48010312..48010328,+ | |||
|coexpression_cluster_id=C4236 | |||
|description=CAGE_peak_2_at_MSH6_5end | |||
|id=chr2:48010312..48010328,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.97e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.80e-07;29 | |||
|ontology_enrichment_disease=DOID:162!4.84e-52!235;DOID:14566!8.80e-51!239;DOID:0050687!9.86e-35!143;DOID:305!7.89e-28!106;DOID:0050686!1.63e-21!137;DOID:2531!1.36e-09!51;DOID:0060083!1.36e-09!51;DOID:1240!1.02e-07!39;DOID:3095!1.28e-07!22;DOID:2994!1.28e-07!22;DOID:8692!2.82e-07!31;DOID:7!7.32e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;6.95e-09;106!DOID:0050687;4.78e-08;143!DOID:3095;9.64e-08;22!DOID:2994;9.64e-08;22!DOID:14566;3.08e-07;239!DOID:8692;4.41e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.81e-52,235;DOID:14566,8.76e-51,239;DOID:0050687,9.82e-35,143;DOID:305,7.87e-28,106;DOID:0050686,1.63e-21,137;DOID:2531,1.36e-09,51;DOID:0060083,1.36e-09,51;DOID:1240,1.02e-07,39;DOID:3095,1.28e-07,22;DOID:2994,1.28e-07,22;DOID:8692,2.81e-07,31;DOID:7,7.32e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@MSH6 | |||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p2@MSH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSH6_5end |
Coexpression cluster: | C4236_retinoblastoma_iPS_small_testicular_HES3GFP_teratocarcinoma_rhabdomyosarcoma |
Association with transcript: | 0bp_to_ENST00000540021, uc010yoi.1_5end |
EntrezGene: | MSH6 |
HGNC: | 7329 |
UniProt: | B4DF41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.97e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.81e-52 | 235 |
disease of cellular proliferation | 8.76e-51 | 239 |
cell type cancer | 9.82e-35 | 143 |
carcinoma | 7.87e-28 | 106 |
organ system cancer | 1.63e-21 | 137 |
hematologic cancer | 1.36e-09 | 51 |
immune system cancer | 1.36e-09 | 51 |
leukemia | 1.02e-07 | 39 |
germ cell and embryonal cancer | 1.28e-07 | 22 |
germ cell cancer | 1.28e-07 | 22 |
myeloid leukemia | 2.81e-07 | 31 |
disease of anatomical entity | 7.32e-07 | 39 |