FFCP PHASE1:Hg19::chr2:89156797..89156840,+: Difference between revisions
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|id=chr2:89156797..89156840,+
|short_description=p2@CU688247,p2@CU689025,p2@CU689831,p2@CU689833,p2@CU689835,p2@CU691143
|description=CAGE_peak_2_at_CU688247_5end,CA...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_CU688247,CU689025,CU689831,CU689833,CU689835,CU691143_5end | |||
|cluster_id=chr2:89156797..89156840,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_2_at_CU688247_5end,CAGE_peak_2_at_CU689025_5end,CAGE_peak_2_at_CU689831_5end,CAGE_peak_2_at_CU689833_5end,CAGE_peak_2_at_CU689835_5end,CAGE_peak_2_at_CU691143_5end | |||
|id=chr2:89156797..89156840,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.84e-31!14;CL:0000945!1.19e-29!24;CL:0000826!1.19e-29!24;CL:0000838!5.66e-14!52;CL:0000542!1.30e-13!53;CL:0000051!1.30e-13!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.14e-45;24!CL:0000236;1.06e-43;13!CL:0000542;1.51e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.96e-47,14;CL:0000945,1.05e-45,24;CL:0000826,1.05e-45,24;CL:0000838,8.12e-19,52;CL:0000542,2.20e-18,53;CL:0000051,2.20e-18,53;CL:0000785,4.47e-09,2;CL:0000955,4.47e-09,2;CL:0000818,4.47e-09,2;CL:0000954,4.47e-09,2;CL:0000816,4.47e-09,2;CL:0002087,4.00e-08,115;CL:0002031,1.29e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-13;53!UBERON:0006965;3.65e-09;2!CL:0000954;4.47e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.97e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.06e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.72e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.78e-37!115;UBERON:0000178!1.70e-14!15;UBERON:0000179!1.70e-14!15;UBERON:0000463!1.70e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.04e-24,114;UBERON:0000178,1.57e-08,15;UBERON:0000179,1.57e-08,15;UBERON:0000463,1.57e-08,15 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,3.56349122669387,3.55423081218554,0,0,0,0,0.447830948479849,1.6194683300949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0796995569058,9.28435639145624,10.6741110463627,11.5217160092957,8.80871171479227,8.62128659931725,10.5767179645578,8.58648379081828,3.41527781465669,5.87237189370939,1.52909291250092,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,1.13929437434833,1.66762242820452,0.411362273086194,1.29694662238543,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0,0,0,5.77819165928102,2.48655523978033,0,0,0,0,0,0,0,4.24166644238815,4.7896618469388,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46346835376959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9099766904916,9.55341696636063,0,0,0,0,0,0,0,4.92627930882298,0,0,0,0,0,1.20054501294127,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71569246167574,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,3.04823995436824,0,0,0,0,0,0,0,0,0,1.89133697518076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,2.77647272676006,0,5.79934677486074,63.5092507919297,145.046937813091,13.2753932235177,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,1.56302802246618,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,0,0,0,0,0,4.03318956445227,0,0,0,0,0,0.156986185701028,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,6.45341038230416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9489382851183,0,0,0.490296643507811,0,0,0,0,0,8.45855261818682,0.322289439867886,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0.267964130156178,0,0,0.426467963801962,0,0.710478008196067,0.186224142887574,0,0.25458863311266,0,0.435433495793923,0,17.7809419958511,4.15988791277523,0,0,0,0,0,0,0,0,0,4.22674966541155,0 | ||
|short_description=p2@CU688247,p2@CU689025,p2@CU689831,p2@CU689833,p2@CU689835,p2@CU691143 | |||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p2@CU688247, p2@CU689025, p2@CU689831, p2@CU689833, p2@CU689835, p2@CU691143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU688247_5end, CAGE_peak_2_at_CU689025_5end, CAGE_peak_2_at_CU689831_5end, CAGE_peak_2_at_CU689833_5end, CAGE_peak_2_at_CU689835_5end, CAGE_peak_2_at_CU691143_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | -34bp_to_CU688247, CU689025, CU689831, CU689833, CU689835, CU691143_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.96e-47 | 14 |
lymphocyte of B lineage | 1.05e-45 | 24 |
pro-B cell | 1.05e-45 | 24 |
lymphoid lineage restricted progenitor cell | 8.12e-19 | 52 |
lymphocyte | 2.20e-18 | 53 |
common lymphoid progenitor | 2.20e-18 | 53 |
mature B cell | 4.47e-09 | 2 |
pre-B-II cell | 4.47e-09 | 2 |
transitional stage B cell | 4.47e-09 | 2 |
small pre-B-II cell | 4.47e-09 | 2 |
immature B cell | 4.47e-09 | 2 |
nongranular leukocyte | 4.00e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.29e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.04e-24 | 114 |
blood | 1.57e-08 | 15 |
haemolymphatic fluid | 1.57e-08 | 15 |
organism substance | 1.57e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.72e-10 | 10 |