FFCP PHASE1:Hg19::chr2:89156903..89156965,+: Difference between revisions
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|id=chr2:89156903..89156965,+
|short_description=p1@CU688247,p1@CU689025,p1@CU689831,p1@CU689833,p1@CU689835,p1@CU691143
|description=CAGE_peak_1_at_CU688247_5end,CA...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_CU688247,CU689025,CU689831,CU689833,CU689835,CU691143_5end | |||
|cluster_id=chr2:89156903..89156965,+ | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_1_at_CU688247_5end,CAGE_peak_1_at_CU689025_5end,CAGE_peak_1_at_CU689831_5end,CAGE_peak_1_at_CU689833_5end,CAGE_peak_1_at_CU689835_5end,CAGE_peak_1_at_CU691143_5end | |||
|id=chr2:89156903..89156965,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.09e-27!14;CL:0000945!2.05e-25!24;CL:0000826!2.05e-25!24;CL:0000838!1.64e-11!52;CL:0000542!3.38e-11!53;CL:0000051!3.38e-11!53;CL:0002087!2.83e-07!119;CL:0000842!8.68e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.94e-40;24!CL:0000236;1.06e-38;13!CL:0000542;8.52e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.84e-42,14;CL:0000945,3.75e-40,24;CL:0000826,3.75e-40,24;CL:0000838,3.55e-16,52;CL:0000542,8.63e-16,53;CL:0000051,8.63e-16,53;CL:0002087,2.27e-08,115;CL:0000785,3.70e-08,2;CL:0000955,3.70e-08,2;CL:0000818,3.70e-08,2;CL:0000954,3.70e-08,2;CL:0000816,3.70e-08,2;CL:0002031,5.54e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;8.52e-12;53!UBERON:0006965;3.27e-08;2!CL:0000954;3.84e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.21e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.54e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.42e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.43e-38!115;UBERON:0000178!2.58e-15!15;UBERON:0000179!2.58e-15!15;UBERON:0000463!2.58e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.04e-10;15!UBERON:0000179;4.04e-10;15!UBERON:0000463;4.04e-10;15!UBERON:0001829;5.29e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.38e-25,114;UBERON:0000178,4.39e-10,15;UBERON:0000179,4.39e-10,15;UBERON:0000463,4.39e-10,15;UBERON:0001829,5.88e-08,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,6.66217924990594,4.26507697462265,0,0,0,0,1.34349284543955,1.6194683300949,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,17.5996244461323,13.1073266702912,14.2321480618169,18.3493995703598,12.8126715851524,20.1163353984069,11.8988077101275,17.1729675816366,7.39976859842283,7.04684627245127,3.05818582500183,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47094550068939,0,0,0,0,0,1.90792499444274,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,1.13929437434833,3.33524485640905,4.93634727703433,0.648473311192717,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0,0,9.56390343605135,5.52567831062295,0,0,0,0,0,0,0,9.27248012987176,11.974154617347,0,0,0,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,6.69467248983034,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,31.8483817945122,18.9299188037146,0,0,0,0,0.202203398942031,0,0,2.55436704901932,0,0,0,0,0,2.71702292402498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40127508823568,0,0,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0.429226048136571,0,0,0,1.16495949527454,0,0,0,0,2.87889329023667,0,0,0,0,0,0,0,0,0,2.52178263357434,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0,0,3.52398461473392,0,9.94173732833269,51.1051002466309,97.0273112618906,10.2305782639953,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,2.34454203369928,0,0,0,0,0,0,0,0,6.030835435429,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,15.671822307586,0,0,0,0,0,0.39246546425257,0,0,0,0,0,2.57315559035963,0,0,0,0,0,0,0,8.60454717640555,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,11.5761237161917,0.218559560503957,0,0.245148321753905,0,0,0,0,0,16.2592178105147,0.902410431630081,0,0,0,0,0,3.21110498383179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5006970412019,0,0,0,0.639701945702943,0,0.387533459016037,0.124149428591716,0,0.318235791390825,0,0.435433495793923,0,36.5048127339064,8.67838685251384,0,0,0,0,0,0,0.488965776731466,0,0,5.63566622054873,0 | ||
|short_description=p1@CU688247,p1@CU689025,p1@CU689831,p1@CU689833,p1@CU689835,p1@CU691143 | |||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p1@CU688247, p1@CU689025, p1@CU689831, p1@CU689833, p1@CU689835, p1@CU691143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU688247_5end, CAGE_peak_1_at_CU689025_5end, CAGE_peak_1_at_CU689831_5end, CAGE_peak_1_at_CU689833_5end, CAGE_peak_1_at_CU689835_5end, CAGE_peak_1_at_CU691143_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 28bp_to_CU688247, CU689025, CU689831, CU689833, CU689835, CU691143_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.84e-42 | 14 |
lymphocyte of B lineage | 3.75e-40 | 24 |
pro-B cell | 3.75e-40 | 24 |
lymphoid lineage restricted progenitor cell | 3.55e-16 | 52 |
lymphocyte | 8.63e-16 | 53 |
common lymphoid progenitor | 8.63e-16 | 53 |
nongranular leukocyte | 2.27e-08 | 115 |
mature B cell | 3.70e-08 | 2 |
pre-B-II cell | 3.70e-08 | 2 |
transitional stage B cell | 3.70e-08 | 2 |
small pre-B-II cell | 3.70e-08 | 2 |
immature B cell | 3.70e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 5.54e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.38e-25 | 114 |
blood | 4.39e-10 | 15 |
haemolymphatic fluid | 4.39e-10 | 15 |
organism substance | 4.39e-10 | 15 |
major salivary gland | 5.88e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.42e-08 | 10 |