FFCP PHASE1:Hg19::chr3:109033420..109033429,-: Difference between revisions
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|id=chr3:109033420..109033429,-
|short_description=p@chr3:109033420..109033429,-
|description=CAGE_peak_at_chr3:109033420..109033429,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:109033420..109033429,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr3:109033420..109033429,- | |||
|id=chr3:109033420..109033429,- | |||
|ontology_enrichment_celltype=CL:0002322!1.78e-71!5;CL:0000039!1.48e-18!7;CL:0000586!1.48e-18!7;CL:0000148!1.35e-13!10;CL:0000541!1.35e-13!10;CL:0000540!1.36e-10!6;CL:0000031!1.36e-10!6;CL:0000404!1.36e-10!6;CL:0000147!7.04e-10!14;CL:0000047!3.63e-08!8;CL:0000710!4.52e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.80e-90;5!CL:0002321;1.22e-30;15!CL:0000148;4.27e-26;10!CL:0000540;9.49e-20;6!CL:0000404;9.49e-20;6!CL:0000147;6.88e-19;14!CL:0000710;1.84e-13;20!CL:0000075;3.69e-10;27!CL:0002077;7.44e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.53e-90,5;CL:0000148,4.66e-26,10;CL:0000541,4.66e-26,10;CL:0000540,7.84e-20,6;CL:0000031,7.84e-20,6;CL:0000404,7.84e-20,6;CL:0000147,7.32e-19,14;CL:0000047,3.79e-15,8;CL:0000710,1.92e-13,20;CL:0000133,6.21e-12,59;CL:0000075,3.81e-10,27;CL:0000221,6.82e-10,72;CL:0002077,3.40e-08,34 | |||
|ontology_enrichment_development_v019=CL:0000031;9.49e-20;6!CL:0000133;3.32e-07;59 | |||
|ontology_enrichment_disease=DOID:4468!2.87e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.53e-16!8;UBERON:0003135!4.77e-12!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;9.90e-11;3!UBERON:0001235;9.90e-11;3!UBERON:0006858;9.90e-11;3!UBERON:0000922;3.75e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.09e-10,3;UBERON:0001235,1.09e-10,3;UBERON:0006858,1.09e-10,3 | |||
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|short_description=p@chr3:109033420..109033429,- | |||
}} | }} |
Latest revision as of 14:06, 29 July 2015
Short description: | p@chr3:109033420..109033429, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:109033420..109033429, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.53e-90 | 5 |
melanocyte | 4.66e-26 | 10 |
melanoblast | 4.66e-26 | 10 |
neuron | 7.84e-20 | 6 |
neuroblast | 7.84e-20 | 6 |
electrically signaling cell | 7.84e-20 | 6 |
pigment cell | 7.32e-19 | 14 |
neuronal stem cell | 3.79e-15 | 8 |
neurecto-epithelial cell | 1.92e-13 | 20 |
neurectodermal cell | 6.21e-12 | 59 |
columnar/cuboidal epithelial cell | 3.81e-10 | 27 |
ectodermal cell | 6.82e-10 | 72 |
ecto-epithelial cell | 3.40e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.09e-10 | 3 |
adrenal cortex | 1.09e-10 | 3 |
adrenal/interrenal gland | 1.09e-10 | 3 |