FFCP PHASE1:Hg19::chr3:121638149..121638175,+: Difference between revisions
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|id=chr3:121638149..121638175,+
|short_description=p@chr3:121638149..121638175,+
|description=CAGE_peak_at_chr3:121638149..121638175,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:121638149..121638175,+ | |||
|description=CAGE_peak_at_chr3:121638149..121638175,+ | |||
|id=chr3:121638149..121638175,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.02e-21!43;CL:0000066!3.64e-17!254;CL:0000223!1.45e-15!59;CL:0002368!5.30e-12!13;CL:0002251!1.09e-10!21;CL:0000068!6.12e-09!3;CL:0000069!6.12e-09!3;CL:0000307!6.12e-09!3;CL:0000377!6.12e-09!3;CL:0002159!7.04e-09!13;CL:0002202!2.41e-07!9;CL:0002632!2.41e-07!9;CL:0000076!5.14e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000307;2.68e-26;3!CL:0000317;6.35e-18;2!CL:1000448;6.35e-18;2!CL:0002308;6.35e-18;2!CL:0002140;6.35e-18;2!CL:0002368;1.99e-16;13!CL:0002202;1.40e-15;9!CL:0002632;1.40e-15;9!CL:0002076;8.05e-11;42!CL:0002336;7.88e-10;1!CL:0002261;7.88e-10;1!CL:0002170;7.88e-10;1!CL:0000622;1.02e-07;5!CL:0002251;2.75e-07;20!CL:0000076;4.15e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.81e-26,3;CL:0000069,3.81e-26,3;CL:0000307,3.81e-26,3;CL:0000377,3.81e-26,3;CL:0000317,3.45e-18,2;CL:1000448,3.45e-18,2;CL:0002308,3.45e-18,2;CL:0002140,3.45e-18,2;CL:0002368,2.09e-16,13;CL:0002202,1.57e-15,9;CL:0002632,1.57e-15,9;CL:0002076,1.85e-15,42;CL:0000223,1.81e-13,58;CL:0000076,1.94e-12,63;CL:0000066,1.53e-10,253;CL:0002336,8.24e-10,1;CL:0002261,8.24e-10,1;CL:0002170,8.24e-10,1;CL:0000622,8.04e-08,5;CL:0002251,2.90e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;2.68e-26;3!CL:0000223;1.97e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.56e-17!14;DOID:305!3.44e-13!106;DOID:0050687!1.58e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.81e-30;14!DOID:3151;3.71e-10;1!DOID:3149;3.71e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.69e-30,14;DOID:3151,3.10e-10,1;DOID:3149,3.10e-10,1;DOID:305,2.72e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.39e-15!169;UBERON:0000925!1.39e-15!169;UBERON:0006595!1.39e-15!169;UBERON:0003729!2.08e-13!5;UBERON:0001004!2.52e-12!72;UBERON:0003343!5.14e-11!4;UBERON:0004785!5.14e-11!4;UBERON:0001007!6.70e-11!155;UBERON:0001555!6.70e-11!155;UBERON:0007026!6.70e-11!155;UBERON:0000065!1.51e-10!53;UBERON:0003126!2.56e-09!7;UBERON:0001005!2.56e-09!7;UBERON:0000072!2.27e-08!46;UBERON:0007196!2.45e-08!14;UBERON:0001558!2.45e-08!14;UBERON:0000365!2.72e-08!5;UBERON:0000077!4.58e-08!130;UBERON:0000161!1.64e-07!35;UBERON:0004921!2.36e-07!129;UBERON:0004185!2.36e-07!129;UBERON:0000344!2.62e-07!12;UBERON:0005910!6.71e-07!6;UBERON:0008947!8.55e-07!38;UBERON:0003258!8.55e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;6.35e-18;2!UBERON:0007771;6.35e-18;2!UBERON:0003297;6.35e-18;2!UBERON:0001821;6.35e-18;2!UBERON:0003487;6.35e-18;2!UBERON:0001820;6.35e-18;2!UBERON:0003126;1.26e-11;7!UBERON:0001005;1.26e-11;7!UBERON:0000997;2.26e-10;1!UBERON:0005056;2.26e-10;1!UBERON:0004176;2.26e-10;1!UBERON:0003343;6.34e-10;4!UBERON:0004785;6.34e-10;4!UBERON:0004913;7.88e-10;1!UBERON:0003703;7.88e-10;1!UBERON:0001174;7.88e-10;1!UBERON:0004914;7.88e-10;1!UBERON:0007196;1.98e-09;15!UBERON:0001558;1.98e-09;15!UBERON:0000974;6.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,3.45e-18,2;UBERON:0007771,3.45e-18,2;UBERON:0003297,3.45e-18,2;UBERON:0001821,3.45e-18,2;UBERON:0003487,3.45e-18,2;UBERON:0001820,3.45e-18,2;UBERON:0005089,3.45e-18,2;UBERON:0005088,3.45e-18,2;UBERON:0003126,1.46e-11,7;UBERON:0001005,1.46e-11,7;UBERON:0000997,2.37e-10,1;UBERON:0005056,2.37e-10,1;UBERON:0003343,6.93e-10,4;UBERON:0004785,6.93e-10,4;UBERON:0004913,9.82e-10,1;UBERON:0003703,9.82e-10,1;UBERON:0001174,9.82e-10,1;UBERON:0004914,9.82e-10,1;UBERON:0007196,2.12e-09,15;UBERON:0001558,2.12e-09,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.904760751704678,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,0.960950336825531,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.92444225451024,2.01090682660736,1.08890984861323,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,2.07875276582847,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,5.80346586256048,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,3.91329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11568069140386,0.174118413160805,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.721429382263803,0,0.999048047910651,0,0,0,0.14405479798815,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,2.34804281319486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.48328306462,0.943757786781923,2.01771458373847,0.231051332300676,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0.0634158101939068,0,0,0,0,5.11049710558381,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0.98150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14264726326789,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0,0.430333232356058,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:121638149..121638175,+ | |||
}} | }} |
Latest revision as of 14:58, 29 July 2015
Short description: | p@chr3:121638149..121638175, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:121638149..121638175, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.81e-26 | 3 |
branched duct epithelial cell | 3.81e-26 | 3 |
tracheal epithelial cell | 3.81e-26 | 3 |
tracheoblast | 3.81e-26 | 3 |
sebum secreting cell | 3.45e-18 | 2 |
epithelial cell of sweat gland | 3.45e-18 | 2 |
epithelial cell of skin gland | 3.45e-18 | 2 |
acinar cell of sebaceous gland | 3.45e-18 | 2 |
respiratory epithelial cell | 2.09e-16 | 13 |
epithelial cell of tracheobronchial tree | 1.57e-15 | 9 |
epithelial cell of lower respiratory tract | 1.57e-15 | 9 |
endo-epithelial cell | 1.85e-15 | 42 |
endodermal cell | 1.81e-13 | 58 |
squamous epithelial cell | 1.94e-12 | 63 |
epithelial cell | 1.53e-10 | 253 |
buccal mucosa cell | 8.24e-10 | 1 |
endothelial cell of viscerocranial mucosa | 8.24e-10 | 1 |
keratinized cell of the oral mucosa | 8.24e-10 | 1 |
acinar cell | 8.04e-08 | 5 |
epithelial cell of alimentary canal | 2.90e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin gland | 3.45e-18 | 2 |
epidermis gland | 3.45e-18 | 2 |
gland of integumental system | 3.45e-18 | 2 |
sebaceous gland | 3.45e-18 | 2 |
skin sebaceous gland | 3.45e-18 | 2 |
sweat gland | 3.45e-18 | 2 |
sweat gland placode | 3.45e-18 | 2 |
sebaceous gland placode | 3.45e-18 | 2 |
trachea | 1.46e-11 | 7 |
respiratory airway | 1.46e-11 | 7 |
mammalian vulva | 2.37e-10 | 1 |
external female genitalia | 2.37e-10 | 1 |
mucosa of oral region | 6.93e-10 | 4 |
respiratory system mucosa | 6.93e-10 | 4 |
hepatopancreatic ampulla | 9.82e-10 | 1 |
extrahepatic bile duct | 9.82e-10 | 1 |
common bile duct | 9.82e-10 | 1 |
duodenal papilla | 9.82e-10 | 1 |
tracheobronchial tree | 2.12e-09 | 15 |
lower respiratory tract | 2.12e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.69e-30 | 14 |
skin squamous cell carcinoma | 3.10e-10 | 1 |
keratoacanthoma | 3.10e-10 | 1 |
carcinoma | 2.72e-08 | 106 |