FFCP PHASE1:Hg19::chr3:182129918..182129932,-: Difference between revisions
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|id=chr3:182129918..182129932,-
|short_description=p@chr3:182129918..182129932,-
|description=CAGE_peak_at_chr3:182129918..182129932,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:182129918..182129932,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr3:182129918..182129932,- | |||
|id=chr3:182129918..182129932,- | |||
|ontology_enrichment_celltype=CL:0000240!1.04e-24!6;CL:0000311!1.04e-24!6;CL:0000079!1.04e-24!6;CL:0000237!1.04e-24!6;CL:0000036!1.04e-24!6;CL:0000357!1.04e-24!6;CL:0000114!1.04e-24!6;CL:0000312!1.28e-19!5;CL:0000242!1.15e-13!2;CL:0000362!2.53e-12!8;CL:0002621!4.25e-09!3;CL:0000076!6.39e-08!62;CL:0000819!1.20e-07!1;CL:0002159!1.28e-07!13;CL:0000035!2.89e-07!20;CL:0002336!6.20e-07!1;CL:0002261!6.20e-07!1;CL:0002170!6.20e-07!1;CL:1001319!6.57e-07!1;CL:1000600!6.57e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.33e-41;2!CL:0000242;7.33e-41;2!CL:0000785;2.82e-21;1!CL:0000819;2.82e-21;1!CL:0000312;5.03e-17;5!CL:0000240;2.33e-14;6!CL:0000311;2.33e-14;6!CL:0000079;2.33e-14;6!CL:0000237;2.33e-14;6!CL:0000362;6.78e-10;9!CL:0000945;3.63e-08;24!CL:0002621;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.33e-41,2;CL:0000819,2.82e-21,1;CL:0000312,5.03e-17,5;CL:0000240,2.33e-14,6;CL:0000311,2.33e-14,6;CL:0000079,2.33e-14,6;CL:0000237,2.33e-14,6;CL:0000036,2.33e-14,6;CL:0000357,2.33e-14,6;CL:0000114,2.33e-14,6;CL:0000785,2.47e-11,2;CL:0000955,2.47e-11,2;CL:0000818,2.47e-11,2;CL:0000954,2.47e-11,2;CL:0000816,2.47e-11,2;CL:0000362,6.78e-10,9;CL:0000945,3.63e-08,24;CL:0000826,3.63e-08,24;CL:0000076,5.32e-08,63;CL:0000817,5.54e-08,3;CL:0002621,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.33e-14;6!CL:0000114;2.33e-14;6!CL:0000954;2.47e-11;2 | |||
|ontology_enrichment_disease=DOID:305!3.31e-08!106;DOID:0060073!1.20e-07!1;DOID:8675!1.20e-07!1;DOID:3151!2.23e-07!1;DOID:3149!2.23e-07!1;DOID:3112!3.21e-07!1;DOID:1749!3.78e-07!14;DOID:178!3.85e-07!1;DOID:326!3.85e-07!1;DOID:3978!3.85e-07!1;DOID:3394!3.85e-07!1;DOID:5844!3.85e-07!1;DOID:162!7.74e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.82e-21;1!DOID:8675;2.82e-21;1!DOID:0060058;1.07e-18;10!DOID:1749;2.78e-13;14!DOID:4556;7.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.82e-21,1;DOID:8675,2.82e-21,1;DOID:0060058,1.07e-18,10;DOID:1749,2.45e-13,14;DOID:4556,6.34e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001003!1.31e-10!14;UBERON:0007376!1.31e-10!14;UBERON:0007383!1.31e-10!14;UBERON:0001949!4.25e-09!3;UBERON:0003102!6.33e-08!95;UBERON:0000344!7.84e-08!12;UBERON:0007029!2.67e-07!1;UBERON:0001154!3.41e-07!1;UBERON:0001153!3.41e-07!1;UBERON:0000014!6.40e-07!4;UBERON:0004645!6.57e-07!1;UBERON:0001256!6.57e-07!1;UBERON:0001259!6.57e-07!1;UBERON:0002372!7.40e-07!1;UBERON:0001961!7.40e-07!1;UBERON:0001744!7.40e-07!1;UBERON:0001735!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.11e-08;22!UBERON:0001949;7.26e-08;3!UBERON:0003729;5.42e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,8.29e-08,3;UBERON:0003729,5.59e-07,13;UBERON:0004807,6.19e-07,28 | |||
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|short_description=p@chr3:182129918..182129932,- | |||
}} | }} |
Latest revision as of 18:38, 29 July 2015
Short description: | p@chr3:182129918..182129932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:182129918..182129932, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.33e-41 | 2 |
B-1 B cell | 2.82e-21 | 1 |
keratinocyte | 5.03e-17 | 5 |
stratified squamous epithelial cell | 2.33e-14 | 6 |
keratin accumulating cell | 2.33e-14 | 6 |
stratified epithelial cell | 2.33e-14 | 6 |
keratinizing barrier epithelial cell | 2.33e-14 | 6 |
epithelial fate stem cell | 2.33e-14 | 6 |
stratified epithelial stem cell | 2.33e-14 | 6 |
surface ectodermal cell | 2.33e-14 | 6 |
mature B cell | 2.47e-11 | 2 |
pre-B-II cell | 2.47e-11 | 2 |
transitional stage B cell | 2.47e-11 | 2 |
small pre-B-II cell | 2.47e-11 | 2 |
immature B cell | 2.47e-11 | 2 |
epidermal cell | 6.78e-10 | 9 |
lymphocyte of B lineage | 3.63e-08 | 24 |
pro-B cell | 3.63e-08 | 24 |
squamous epithelial cell | 5.32e-08 | 63 |
precursor B cell | 5.54e-08 | 3 |
gingival epithelial cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 8.29e-08 | 3 |
mouth mucosa | 5.59e-07 | 13 |
respiratory system epithelium | 6.19e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.82e-21 | 1 |
lymphosarcoma | 2.82e-21 | 1 |
lymphoma | 1.07e-18 | 10 |
squamous cell carcinoma | 2.45e-13 | 14 |
lung large cell carcinoma | 6.34e-08 | 3 |