FFCP PHASE1:Hg19::chr3:32859593..32859606,+: Difference between revisions
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|id=chr3:32859593..32859606,+
|short_description=p3@TRIM71
|description=CAGE_peak_3_at_TRIM71_5end
|association_with_transcript=20bp_to_BC156152,BC157052_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131405 | |EntrezGene=131405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32669 | |HGNC=32669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_BC156152,BC157052_5end | |||
|cluster_id=chr3:32859593..32859606,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_TRIM71_5end | |||
|id=chr3:32859593..32859606,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.53e-34!7;CL:0000586!2.53e-34!7;CL:0002322!5.61e-27!5;CL:0000540!1.08e-08!6;CL:0000031!1.08e-08!6;CL:0000404!1.08e-08!6;CL:0000181!6.73e-07!12;CL:0000417!6.73e-07!12;CL:0000668!6.73e-07!12;CL:0000414!6.73e-07!12;CL:0000412!6.73e-07!12;CL:0000182!6.73e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.67e-71;5!CL:0002321;7.24e-24;15!CL:0000540;3.78e-22;6!CL:0000404;3.78e-22;6!CL:0000148;1.82e-13;10!CL:0000147;8.70e-10;14!CL:0000710;5.23e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.18e-71,5;CL:0000540,3.51e-22,6;CL:0000031,3.51e-22,6;CL:0000404,3.51e-22,6;CL:0000047,8.26e-17,8;CL:0000148,1.82e-13,10;CL:0000541,1.82e-13,10;CL:0000147,8.70e-10,14;CL:0000133,3.48e-08,59;CL:0000710,5.23e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;3.78e-22;6 | |||
|ontology_enrichment_disease=DOID:3095!3.45e-17!22;DOID:2994!3.45e-17!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.48e-15!8;UBERON:0003135!2.98e-11!11;UBERON:0000991!3.69e-08!21;UBERON:0009196!3.69e-08!21;UBERON:0009117!3.69e-08!21;UBERON:0005564!3.69e-08!21;UBERON:0004176!9.23e-08!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@TRIM71 | |||
}} | }} |
Latest revision as of 23:35, 17 September 2015
Short description: | p3@TRIM71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM71_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 20bp_to_BC156152, BC157052_5end |
EntrezGene: | TRIM71 |
HGNC: | 32669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.18e-71 | 5 |
neuron | 3.51e-22 | 6 |
neuroblast | 3.51e-22 | 6 |
electrically signaling cell | 3.51e-22 | 6 |
neuronal stem cell | 8.26e-17 | 8 |
melanocyte | 1.82e-13 | 10 |
melanoblast | 1.82e-13 | 10 |
pigment cell | 8.70e-10 | 14 |
neurectodermal cell | 3.48e-08 | 59 |
neurecto-epithelial cell | 5.23e-07 | 20 |