FFCP PHASE1:Hg19::chr3:33260352..33260365,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:33260352..33260365,-
|short_description=p3@SUSD5
|description=CAGE_peak_3_at_SUSD5_5end
|association_with_transcript=-67bp_to_ENST00000412539_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26032 | |EntrezGene=26032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29061 | |HGNC=29061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000412539_5end | |||
|cluster_id=chr3:33260352..33260365,- | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_3_at_SUSD5_5end | |||
|id=chr3:33260352..33260365,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;4.47e-11;9!CL:0002573;5.49e-09;2!CL:0000135;5.49e-09;3!CL:0000388;5.49e-09;3!CL:0000222;9.37e-08;1!CL:0000511;2.34e-07;1!CL:0002625;2.34e-07;1!CL:0000228;2.34e-07;1!CL:0000216;2.34e-07;1!CL:0002372;2.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.97e-14,11;CL:0000375,6.97e-14,11;CL:0000335,6.97e-14,11;CL:0002573,3.82e-09,2;CL:0000135,6.74e-09,3;CL:0000388,6.74e-09,3;CL:0000511,1.25e-07,1;CL:0002625,1.25e-07,1;CL:0000216,1.25e-07,1;CL:0000228,1.83e-07,1;CL:0002372,1.83e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000335;1.05e-13;11!UBERON:0006242;2.34e-07;1!UBERON:0010115;2.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.98e-08;1!DOID:3347;9.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.00e-08,1;DOID:3347,9.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.66e-18!115;UBERON:0000073!2.24e-14!94;UBERON:0001016!2.24e-14!94;UBERON:0005743!2.64e-14!86;UBERON:0001017!7.83e-14!82;UBERON:0000955!2.75e-12!69;UBERON:0006238!2.75e-12!69;UBERON:0001049!2.21e-11!57;UBERON:0005068!2.21e-11!57;UBERON:0006241!2.21e-11!57;UBERON:0007135!2.21e-11!57;UBERON:0002616!1.32e-10!59;UBERON:0003075!4.64e-10!86;UBERON:0007284!4.64e-10!86;UBERON:0002619!5.29e-10!22;UBERON:0000477!7.63e-10!286;UBERON:0001893!1.86e-09!34;UBERON:0002020!3.28e-09!34;UBERON:0003528!3.28e-09!34;UBERON:0002346!4.41e-09!90;UBERON:0001950!8.91e-09!20;UBERON:0002791!1.04e-08!33;UBERON:0002780!1.50e-08!41;UBERON:0001890!1.50e-08!41;UBERON:0006240!1.50e-08!41;UBERON:0001869!2.65e-08!32;UBERON:0000025!3.00e-08!194;UBERON:0000956!3.10e-08!25;UBERON:0000203!3.10e-08!25;UBERON:0003080!3.49e-08!42;UBERON:0000153!8.79e-08!129;UBERON:0007811!8.79e-08!129;UBERON:0004111!1.46e-07!241;UBERON:0000033!1.89e-07!123;UBERON:0000200!3.52e-07!6;UBERON:0004121!6.06e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.49e-09;3!UBERON:0000043;5.49e-09;3!UBERON:0007845;5.49e-09;3!UBERON:0001474;2.73e-08;18!UBERON:0004765;6.69e-08;26!UBERON:0002363;2.34e-07;1!UBERON:0002146;2.34e-07;1!UBERON:0001136;2.34e-07;1!UBERON:0001343;2.34e-07;1!UBERON:0005623;2.34e-07;1!UBERON:0004910;2.34e-07;1!UBERON:0004813;2.34e-07;1!UBERON:0007190;2.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.74e-09,3;UBERON:0000043,6.74e-09,3;UBERON:0007845,6.74e-09,3;UBERON:0001136,1.25e-07,1;UBERON:0001343,1.25e-07,1;UBERON:0004910,1.25e-07,1;UBERON:0005154,1.25e-07,1;UBERON:0005295,1.25e-07,1;UBERON:0004813,1.25e-07,1;UBERON:0005297,1.25e-07,1;UBERON:0005294,1.25e-07,1;UBERON:0010141,1.25e-07,1;UBERON:0005891,1.25e-07,1;UBERON:0002146,2.21e-07,1;UBERON:0005623,2.21e-07,1;UBERON:0007190,4.34e-07,1;UBERON:0002363,4.61e-07,1;UBERON:0007645,4.61e-07,1;UBERON:0007647,4.61e-07,1;UBERON:0010115,4.61e-07,1 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0.74259811776028,0.994192127183747,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,7.15757352345989,8.75942766544745,0,0.665188192387692,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,2.00832367658802,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,1.2333377420858,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,1.5985330740966,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.00034104211935,0.813795071099207,0.415941723061614,0.713715955188647,0,0,0,0,0,1.99267679560631,0.553107505625109,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0,1.96808787419823,0,0,1.37354197227515,1.32015199872941,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,1.25924938732256,0.6970372701606,0,0,0,0.18532421910392,0.572499546967965,0,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.422250816255987,20.5225427898602,0.276283915531148,0,1.53403023753232,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,1.01098527405581,0.150323419414493,0,0,0.330991955875499,1.2557316736289,0,0,0,0.173559738335131,0,0,0.873633341210151,4.64362287673365,0,0,0,0,0,0,0.137041924646751,0,0.823040347426423,0,0,1.06726497369676,0,0,0.114536596165916,0,0,0.124252535565433,0,0.543616824294456,0.418411385249333,0.305994652908965,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,1.3749625440701,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0.275078873194468,0,0,0,0.364497339948148,0,0,0.104909176269996,1.16160370171347,0,0,0,0,0.76280561296425,0,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,0,0,0.258565912723101,0.52893040697076,0,0.704815022316672,0.320362237703084,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,2.65820453990096,0.488105059607853,0.500763722825999,0,0.554645257684261,0.683060432355218,0,0.499921631848426,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862598491173454,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.642292250964595,0,0.159633859057151,0.615349092722265,0,0.96820153449905,0.484426936895553,0,0,0,0,0,1.52552838186867,2.0710797781803,0.198916222116275,0.150420656698515,0,0,0,0,0,1.01306376927592,0,1.03343398250592,0.824405532520789,0,0,0,0,0.127762427639595,0,0.672567444437648,0,0,0,0,0,0.339848664884159,0.920818829879887,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,1.41998400876678,1.53384128566484,0.423387050190929,0.22910686854405,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0.485710993059139,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0.679914901909147,0,0,1.11598505450025,1.38652688589425,0,0,0,0,0.101988829741982,0,0,0,0.757786982182394,0.267964130156178,0,0.310298987585686,0.21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| ||
|short_description=p3@SUSD5 | |||
}} | }} |
Latest revision as of 00:11, 18 September 2015
Short description: | p3@SUSD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUSD5_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -67bp_to_ENST00000412539_5end |
EntrezGene: | SUSD5 |
HGNC: | 29061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.97e-14 | 11 |
osteoprogenitor cell | 6.97e-14 | 11 |
mesenchyme condensation cell | 6.97e-14 | 11 |
Schwann cell | 3.82e-09 | 2 |
fibrocyte | 6.74e-09 | 3 |
tendon cell | 6.74e-09 | 3 |
androgen binding protein secreting cell | 1.25e-07 | 1 |
seminiferous tubule epithelial cell | 1.25e-07 | 1 |
Sertoli cell | 1.25e-07 | 1 |
multinucleate cell | 1.83e-07 | 1 |
myotube | 1.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.74e-09 | 3 |
tendon | 6.74e-09 | 3 |
regular connective tissue | 6.74e-09 | 3 |
mesothelium | 1.25e-07 | 1 |
seminiferous tubule of testis | 1.25e-07 | 1 |
epithelium of male gonad | 1.25e-07 | 1 |
epithelial cord | 1.25e-07 | 1 |
sex cord | 1.25e-07 | 1 |
seminiferous tubule epithelium | 1.25e-07 | 1 |
testis sex cord | 1.25e-07 | 1 |
genital ridge | 1.25e-07 | 1 |
primitive sex cord of indifferent gonad | 1.25e-07 | 1 |
coelomic epithelium | 1.25e-07 | 1 |
pulmonary valve | 2.21e-07 | 1 |
semi-lunar valve | 2.21e-07 | 1 |
paracentral gyrus | 4.34e-07 | 1 |
dura mater | 4.61e-07 | 1 |
future meninx | 4.61e-07 | 1 |
ectomeninx | 4.61e-07 | 1 |
future dura mater | 4.61e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.00e-08 | 1 |
osteosarcoma | 9.71e-08 | 1 |