FFCP PHASE1:Hg19::chr4:11430941..11430960,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:11430941..11430960,-
|short_description=p5@HS3ST1
|description=CAGE_peak_5_at_HS3ST1_5end
|association_with_transcript=-404bp_to_NM_005114,uc003gmq.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9957 | |EntrezGene=9957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5194 | |HGNC=5194 | ||
|TSSclassifier=strong | |||
|UniProt=O14792 | |UniProt=O14792 | ||
|association_with_transcript=-404bp_to_NM_005114,uc003gmq.2_5end | |||
|cluster_id=chr4:11430941..11430960,- | |||
|description=CAGE_peak_5_at_HS3ST1_5end | |||
|id=chr4:11430941..11430960,- | |||
|ontology_enrichment_celltype=CL:0000066!6.46e-10!254;CL:0002076!6.42e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.02e-12;3!CL:0002327;1.51e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.23e-13,3;CL:0000066,1.25e-09,253;CL:0002327,1.68e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.05e-13;3 | |||
|ontology_enrichment_disease=DOID:1749!1.59e-12!14;DOID:305!5.01e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;9.07e-10;2!DOID:1749;3.32e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,8.92e-10,2;DOID:1749,3.45e-07,14;DOID:305,3.90e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-11!115;UBERON:0000062!1.88e-10!511;UBERON:0000467!3.33e-08!625;UBERON:0000480!4.08e-08!626;UBERON:0000922!8.50e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.02e-12;3!UBERON:0002394;3.21e-10;4!UBERON:0003928;3.21e-10;4!UBERON:0002294;4.83e-10;7!UBERON:0001173;4.83e-10;7!UBERON:0000058;4.89e-10;10!UBERON:0001911;1.51e-09;4!UBERON:0000486;3.55e-08;12!UBERON:0003350;4.02e-08;8!UBERON:0000344;9.20e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.23e-13,3;UBERON:0001911,1.68e-09,4;UBERON:0005333,1.68e-09,4;UBERON:0008425,1.68e-09,4;UBERON:0005311,1.68e-09,4;UBERON:0003350,3.80e-08,8;UBERON:0002294,8.10e-08,9;UBERON:0001173,8.10e-08,9;UBERON:0004912,8.10e-08,9;UBERON:0002394,5.96e-07,6;UBERON:0003928,5.96e-07,6;UBERON:0000344,8.73e-07,20 | |||
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| ||
|short_description=p5@HS3ST1 | |||
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Latest revision as of 19:15, 24 September 2015
Short description: | p5@HS3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HS3ST1_5end |
Coexpression cluster: | NA |
Association with transcript: | -404bp_to_NM_005114, uc003gmq.2_5end |
EntrezGene: | HS3ST1 |
HGNC: | 5194 |
UniProt: | O14792 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.23e-13 | 3 |
epithelial cell | 1.25e-09 | 253 |
mammary gland epithelial cell | 1.68e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.23e-13 | 3 |
mammary gland | 1.68e-09 | 4 |
mammary bud | 1.68e-09 | 4 |
mammary ridge | 1.68e-09 | 4 |
mammary placode | 1.68e-09 | 4 |
epithelium of mucosa | 3.80e-08 | 8 |
biliary system | 8.10e-08 | 9 |
biliary tree | 8.10e-08 | 9 |
biliary bud | 8.10e-08 | 9 |
bile duct | 5.96e-07 | 6 |
digestive system duct | 5.96e-07 | 6 |
mucosa | 8.73e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 8.92e-10 | 2 |
squamous cell carcinoma | 3.45e-07 | 14 |
carcinoma | 3.90e-07 | 106 |