FFCP PHASE1:Hg19::chr4:120550160..120550201,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:120550160..120550201,-
|short_description=p4@PDE5A
|description=CAGE_peak_4_at_PDE5A_5end
|association_with_transcript=-14bp_to_ENST00000354960_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=-14bp_to_ENST00000354960_5end | |||
|cluster_id=chr4:120550160..120550201,- | |||
|description=CAGE_peak_4_at_PDE5A_5end | |||
|id=chr4:120550160..120550201,- | |||
|ontology_enrichment_celltype=CL:0000055!2.88e-22!180;CL:0000057!2.63e-17!75;CL:0000183!2.17e-08!59;CL:0000680!2.21e-08!57;CL:0000056!2.21e-08!57;CL:0000355!2.21e-08!57;CL:0000192!2.62e-08!42;CL:0000514!2.62e-08!42;CL:0000187!4.98e-08!54;CL:0002620!2.41e-07!23;CL:0000393!5.28e-07!60;CL:0000211!5.28e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.30e-08;23!CL:0000192;9.18e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.04e-16,76;CL:0000192,2.03e-08,43;CL:0000514,2.03e-08,43;CL:0002620,5.62e-08,23;CL:0000187,3.47e-07,55;CL:0000680,5.54e-07,58;CL:0000056,5.54e-07,58;CL:0000355,5.54e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;9.18e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-12!115;UBERON:0000914!3.46e-10!83;UBERON:0002329!3.46e-10!83;UBERON:0003077!3.46e-10!83;UBERON:0003059!3.46e-10!83;UBERON:0007282!3.46e-10!83;UBERON:0009618!3.46e-10!83;UBERON:0007285!3.46e-10!83;UBERON:0001009!2.19e-09!113;UBERON:0002385!2.28e-09!63;UBERON:0001015!2.28e-09!63;UBERON:0000383!2.28e-09!63;UBERON:0000475!7.14e-09!365;UBERON:0004535!9.05e-09!110;UBERON:0001134!1.07e-08!61;UBERON:0002036!1.07e-08!61;UBERON:0003082!1.07e-08!61;UBERON:0000481!7.28e-08!347;UBERON:0000468!9.61e-08!659;UBERON:0004290!1.11e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;6.96e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,2.20e-08,64;UBERON:0001015,2.20e-08,64;UBERON:0000383,2.20e-08,64;UBERON:0001134,1.30e-07,62;UBERON:0002036,1.30e-07,62;UBERON:0003082,1.30e-07,62;UBERON:0000075,5.79e-07,16;UBERON:0001009,5.82e-07,112 | |||
|phase1_expression=2.36181893051724,1.49870366723688,1.9733616573436,1.0007329835313,2.68176656656373,0.872338524100369,0,0,1.04474251279935,0.245733936501509,0,0,0,4.82688776544182,7.62213964174206,0,1.20538905604795,1.46062018077475,0,0.738726348460727,2.24400760368678,0.313454721478088,0.572471974262113,0,0.502170558379211,0.229240217243854,0,0.0787107813136792,0,1.15148819429164,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0.821127996921047,0.604820229674197,0.802320587350522,0,0,0.670700859703636,0.511450247374121,2.53007406669196,8.02140657017423,3.33146993609895,0.795285947051099,0,1.70162670895322,2.88248216701333,1.66886092816939,1.11332214173056,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,1.72046919021225,0.694281003215189,1.13061588384802,0.838998872419812,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,1.62028389576352,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,0,0,0,6.95760732373446,0.886413581652058,3.57504788195691,10.3261183469573,3.90135220418193,0.560677600142307,1.06748995729705,1.2333377420858,1.24484414159907,1.61652806483626,0.490385709340376,2.57307626996383,6.33793516927999,0.937285727335186,0.624320153660641,0,0.298897361103602,1.17434498643765,1.45685649931318,0.561803226808994,6.94124182266637,2.08818339430006,5.26961483996404,3.56400857184616,10.1379441004208,0.910161361938026,1.43723628363248,2.69337782326506,3.62843707628696,6.09541054065202,8.34057479673592,4.59731693698529,5.70904623845068,0.680593098960126,6.45802688479903,4.27114777637135,4.4505699243508,4.50136644126603,6.08009922506789,10.0479810617795,6.88632368426882,1.18143432568886,1.94874010322397,7.82544700156755,4.32634523618807,9.86040946594752,7.4552014428489,2.21654616100809,2.20428770003634,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0.232387885739037,0.725627385107593,0.252320850875628,0,0,1.28648187638577,0,6.96551892047969,4.33127689001751,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0.71181185733329,0.269662616320329,0.196221465125346,0.769494313892781,0.738155454624648,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,1.02940686179115,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,2.07986957055916,1.44331342025273,1.27523445472584,2.81780866165972,0.433099343283221,0,0.570762456703795,1.58040879591855,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.616339038092582,5.59785911960085,6.48539790376326,4.79721247020244,1.65094525159639,0.763976851116555,0,0,0.719792448923265,0.300343057843917,0,1.79409734952577,3.05172048183296,1.24675085895615,2.32689088364,0,2.535908257668,3.45719551560332,3.12022310734098,1.80045161983499,1.41849132023278,0.532844358032199,3.57444984145369,0,0.823240336780769,0.325736184293735,4.6200953336531,0,2.1100756394171,0,1.79951384127703,0,0,0,3.35474797688216,4.59447743336456,0,0.579125226670317,3.08214483825575,0.716243852959582,0,0.788123040807709,0.646882724578552,0.513372145118994,0.76228387266739,1.30139853857622,0,0.670065061337395,1.27587750330633,0,0,1.65766205374414,7.23879801142925,9.00306937907419,4.6115054028955,3.32753378449291,2.3195768543631,2.83864347061082,6.67706065458465,3.31040709700491,0,2.0694614258501,1.99267679560631,2.21243002250044,2.60650843404249,2.54541504701563,1.37257369524342,1.03384013061444,0.215714200818617,0.426910231213777,0,0,0,3.2254015016441,4.14347327877769,3.36792113319688,3.58789617915963,3.07024349440022,3.37793234401576,1.48418066444991,0.154209693802656,0.355123450626254,0.98552587216571,2.07701771673448,0.697262270759755,0.120859449591622,0,0.368323955743585,1.14814448164607,2.54927635209404,2.49136388422906,0,0.15403067420883,0,0,0.316654886678627,1.13733384070897,0.510281115829547,0.647747748306418,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,1.30151357865721,1.44257416306811,2.28923662045859,1.81520899825294,0.574265537996172,0,0,0.290012154876366,1.69453478826109,1.07452572308291,0.827019434907183,1.50388342815583,2.61030049045611,0.596586391912706,1.33548053470106,0.165284915360978,0,0.255225424989168,0.2023155617111,2.32422774648643,3.46293581513704,2.7881490806424,1.54016790088044,1.59691809095107,1.73986598415015,1.11194531462352,2.28999818787186,1.48863347743867,2.21465597303108,1.14378116354295,2.303080121802,11.5543526769159,2.22742273548156,0.78494864019923,2.69808686374972,4.66712950551293,2.47406044925942,0.606547444719948,3.17020642346017,2.10629228119491,0.48763373908959,0.974853958525138,1.05650146756755,2.8664981395677,1.83827061539827,2.26016233240486,2.2054613741845,0.66343897524122,1.31535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|phase1_expression=2.36181893051724,1.49870366723688,1.9733616573436,1.0007329835313,2.68176656656373,0.872338524100369,0,0,1.04474251279935,0.245733936501509,0,0,0,4.82688776544182,7.62213964174206,0,1.20538905604795,1.46062018077475,0,0.738726348460727,2.24400760368678,0.313454721478088,0.572471974262113,0,0.502170558379211,0.229240217243854,0,0.0787107813136792,0,1.15148819429164,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0.821127996921047,0.604820229674197,0.802320587350522,0,0,0.670700859703636,0.511450247374121,2.53007406669196,8.02140657017423,3.33146993609895,0.795285947051099,0,1.70162670895322,2.88248216701333,1.66886092816939,1.11332214173056,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,1.72046919021225,0.694281003215189,1.13061588384802,0.838998872419812,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,1.62028389576352,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,0,0,0,6.95760732373446,0.886413581652058,3.57504788195691,10.3261183469573,3.90135220418193,0.560677600142307,1.06748995729705,1.2333377420858,1.24484414159907,1.61652806483626,0.490385709340376,2.57307626996383,6.33793516927999,0.937285727335186,0.624320153660641,0,0.298897361103602,1.17434498643765,1.45685649931318,0.561803226808994,6.94124182266637,2.08818339430006,5.26961483996404,3.56400857184616,10.1379441004208,0.910161361938026,1.43723628363248,2.69337782326506,3.62843707628696,6.09541054065202,8.34057479673592,4.59731693698529,5.70904623845068,0.680593098960126,6.45802688479903,4.27114777637135,4.4505699243508,4.50136644126603,6.08009922506789,10.0479810617795,6.88632368426882,1.18143432568886,1.94874010322397,7.82544700156755,4.32634523618807,9.86040946594752,7.4552014428489,2.21654616100809,2.20428770003634,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0.232387885739037,0.725627385107593,0.252320850875628,0,0,1.28648187638577,0,6.96551892047969,4.33127689001751,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0.71181185733329,0.269662616320329,0.196221465125346,0.769494313892781,0.738155454624648,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,1.02940686179115,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,2.07986957055916,1.44331342025273,1.27523445472584,2.81780866165972,0.433099343283221,0,0.570762456703795,1.58040879591855,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.616339038092582,5.59785911960085,6.48539790376326,4.79721247020244,1.65094525159639,0.763976851116555,0,0,0.719792448923265,0.300343057843917,0,1.79409734952577,3.05172048183296,1.24675085895615,2.32689088364,0,2.535908257668,3.45719551560332,3.12022310734098,1.80045161983499,1.41849132023278,0.532844358032199,3.57444984145369,0,0.823240336780769,0.325736184293735,4.6200953336531,0,2.1100756394171,0,1.79951384127703,0,0,0,3.35474797688216,4.59447743336456,0,0.579125226670317,3.08214483825575,0.716243852959582,0,0.788123040807709,0.646882724578552,0.513372145118994,0.76228387266739,1.30139853857622,0,0.670065061337395,1.27587750330633,0,0,1.65766205374414,7.23879801142925,9.00306937907419,4.6115054028955,3.32753378449291,2.3195768543631,2.83864347061082,6.67706065458465,3.31040709700491,0,2.0694614258501,1.99267679560631,2.21243002250044,2.60650843404249,2.54541504701563,1.37257369524342,1.03384013061444,0.215714200818617,0.426910231213777,0,0,0,3.2254015016441,4.14347327877769,3.36792113319688,3.58789617915963,3.07024349440022,3.37793234401576,1.48418066444991,0.154209693802656,0.355123450626254,0.98552587216571,2.07701771673448,0.697262270759755,0.120859449591622,0,0.368323955743585,1.14814448164607,2.54927635209404,2.49136388422906,0,0.15403067420883,0,0,0.316654886678627,1.13733384070897,0.510281115829547,0.647747748306418,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,1.30151357865721,1.44257416306811,2.28923662045859,1.81520899825294,0.574265537996172,0,0,0.290012154876366,1.69453478826109,1.07452572308291,0.827019434907183,1.50388342815583,2.61030049045611,0.596586391912706,1.33548053470106,0.165284915360978,0,0.255225424989168,0.2023155617111,2.32422774648643,3.46293581513704,2.7881490806424,1.54016790088044,1.59691809095107,1.73986598415015,1.11194531462352,2.28999818787186,1.48863347743867,2.21465597303108,1.14378116354295,2.303080121802,11.5543526769159,2.22742273548156,0.78494864019923,2.69808686374972,4.66712950551293,2.47406044925942,0.606547444719948,3.17020642346017,2.10629228119491,0.48763373908959,0.974853958525138,1.05650146756755,2.8664981395677,1.83827061539827,2.26016233240486,2.2054613741845,0.66343897524122,1.31535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| ||
|short_description=p4@PDE5A | |||
}} | }} |
Latest revision as of 23:07, 24 September 2015
Short description: | p4@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDE5A_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000354960_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.04e-16 | 76 |
smooth muscle cell | 2.03e-08 | 43 |
smooth muscle myoblast | 2.03e-08 | 43 |
skin fibroblast | 5.62e-08 | 23 |
muscle cell | 3.47e-07 | 55 |
muscle precursor cell | 5.54e-07 | 58 |
myoblast | 5.54e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 2.20e-08 | 64 |
musculature | 2.20e-08 | 64 |
musculature of body | 2.20e-08 | 64 |
skeletal muscle tissue | 1.30e-07 | 62 |
striated muscle tissue | 1.30e-07 | 62 |
myotome | 1.30e-07 | 62 |
subdivision of skeletal system | 5.79e-07 | 16 |
circulatory system | 5.82e-07 | 112 |