FFCP PHASE1:Hg19::chr4:169552329..169552340,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:169552329..169552340,+
|short_description=p34@PALLD
|description=CAGE_peak_34_at_PALLD_5end
|association_with_transcript=-425bp_to_ENST00000504519_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23022 | |EntrezGene=23022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |HGNC=17068 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBH5 | |UniProt=D6RBH5 | ||
|association_with_transcript=-425bp_to_ENST00000504519_5end | |||
|cluster_id=chr4:169552329..169552340,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_34_at_PALLD_5end | |||
|id=chr4:169552329..169552340,+ | |||
|ontology_enrichment_celltype=CL:0000128!5.49e-22!7;CL:0000126!5.49e-22!7;CL:0000127!5.49e-22!7;CL:0002453!5.49e-22!7;CL:0000095!1.58e-17!17;CL:0000123!1.58e-17!17;CL:0002319!2.06e-16!25;CL:0000243!2.64e-13!15;CL:0000125!2.64e-13!15;CL:0000030!2.64e-13!15;CL:0000339!2.64e-13!15;CL:0002334!1.23e-11!12;CL:0000055!4.23e-11!180;CL:0002580!1.27e-10!3;CL:0002603!1.90e-10!3;CL:0002605!3.01e-10!3;CL:0000133!3.38e-10!59;CL:0000221!4.71e-10!71;CL:0000333!3.63e-09!41;CL:0000242!4.87e-07!2;CL:0002617!8.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002580;2.64e-38;3!CL:0000128;7.11e-37;7!CL:0000126;7.11e-37;7!CL:0000127;7.11e-37;7!CL:0000243;1.07e-15;15!CL:0000125;1.07e-15;15!CL:0002253;1.15e-15;2!CL:0000095;3.96e-14;17!CL:0002603;7.42e-11;3!CL:0002605;9.90e-11;3!CL:0002334;2.13e-10;12!CL:0002319;3.69e-10;25!CL:0002563;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,3.19e-38,3;CL:0000128,4.92e-37,7;CL:0000126,4.92e-37,7;CL:0000127,4.92e-37,7;CL:0002453,4.92e-37,7;CL:0000243,9.16e-16,15;CL:0000125,9.16e-16,15;CL:0000030,9.16e-16,15;CL:0000339,9.16e-16,15;CL:0002253,1.15e-15,2;CL:0000095,3.46e-14,17;CL:0000123,3.46e-14,17;CL:0002603,7.42e-11,3;CL:0002605,8.17e-11,3;CL:0002334,2.24e-10,12;CL:0002319,3.36e-10,25;CL:0002563,1.70e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000339;1.07e-15;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!1.19e-07!10;UBERON:0001443!6.46e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.81e-12;10!UBERON:0001443;2.98e-11;11!UBERON:0001052;1.70e-08;4!UBERON:0001242;1.70e-08;4!UBERON:0001262;1.70e-08;4!UBERON:0004786;1.70e-08;4!UBERON:0004808;1.70e-08;4!UBERON:0001277;1.70e-08;4!UBERON:0004907;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.98e-12,10;UBERON:0001443,3.14e-11,11;UBERON:0001052,1.70e-08,4;UBERON:0001242,1.70e-08,4;UBERON:0001262,1.70e-08,4;UBERON:0004786,1.70e-08,4;UBERON:0004808,1.70e-08,4;UBERON:0001277,1.70e-08,4;UBERON:0004907,4.79e-07,5 | |||
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| ||
|short_description=p34@PALLD | |||
}} | }} |
Latest revision as of 16:33, 16 September 2015
Short description: | p34@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_PALLD_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | -425bp_to_ENST00000504519_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | D6RBH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 3.19e-38 | 3 |
oligodendrocyte | 4.92e-37 | 7 |
macroglial cell | 4.92e-37 | 7 |
astrocyte | 4.92e-37 | 7 |
oligodendrocyte precursor cell | 4.92e-37 | 7 |
glial cell (sensu Vertebrata) | 9.16e-16 | 15 |
glial cell | 9.16e-16 | 15 |
glioblast | 9.16e-16 | 15 |
glioblast (sensu Vertebrata) | 9.16e-16 | 15 |
epithelial cell of large intestine | 1.15e-15 | 2 |
neuron associated cell | 3.46e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 3.46e-14 | 17 |
astrocyte of the cerebellum | 7.42e-11 | 3 |
astrocyte of the cerebral cortex | 8.17e-11 | 3 |
preadipocyte | 2.24e-10 | 12 |
neural cell | 3.36e-10 | 25 |
intestinal epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 2.98e-12 | 10 |
chest | 3.14e-11 | 11 |
rectum | 1.70e-08 | 4 |
intestinal mucosa | 1.70e-08 | 4 |
wall of intestine | 1.70e-08 | 4 |
gastrointestinal system mucosa | 1.70e-08 | 4 |
gastrointestinal system epithelium | 1.70e-08 | 4 |
intestinal epithelium | 1.70e-08 | 4 |
lower digestive tract | 4.79e-07 | 5 |