FFCP PHASE1:Hg19::chr4:169623845..169623853,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:169623845..169623853,+
|short_description=p@chr4:169623845..169623853,+
|description=CAGE_peak_at_chr4:169623845..169623853,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:169623845..169623853,+ | |||
|description=CAGE_peak_at_chr4:169623845..169623853,+ | |||
|id=chr4:169623845..169623853,+ | |||
|ontology_enrichment_celltype=CL:0000188!9.47e-19!9;CL:0000064!3.81e-13!3;CL:0005012!3.81e-13!3;CL:0000067!3.81e-13!3;CL:0002304!3.81e-13!3;CL:0002590!1.34e-12!3;CL:0000594!1.75e-11!3;CL:0000035!3.67e-11!20;CL:0000680!3.36e-08!57;CL:0000056!3.36e-08!57;CL:0000355!3.36e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.86e-53;3!CL:0000067;2.86e-53;3!CL:0005012;2.86e-53;3!CL:0002304;2.86e-53;3!CL:0002605;1.60e-14;3!CL:0000710;5.93e-09;20!CL:0002569;6.33e-08;6!CL:0000128;5.70e-07;7!CL:0000126;5.70e-07;7!CL:0000127;5.70e-07;7!CL:0000075;7.03e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.87e-53,3;CL:0000067,2.87e-53,3;CL:0005012,2.87e-53,3;CL:0002304,2.87e-53,3;CL:0002605,2.09e-14,3;CL:0000710,5.93e-09,20;CL:0002569,6.34e-08,6;CL:0000128,6.39e-07,7;CL:0000126,6.39e-07,7;CL:0000127,6.39e-07,7;CL:0002453,6.39e-07,7;CL:0000075,7.03e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!3.81e-13!3;UBERON:0001775!3.81e-13!3;UBERON:0002200!9.25e-13!11;UBERON:0006876!9.25e-13!11;UBERON:0000488!5.87e-10!4;UBERON:0005284!1.02e-07!5;UBERON:0001134!1.73e-07!61;UBERON:0002036!1.73e-07!61;UBERON:0003082!1.73e-07!61;UBERON:0002385!3.63e-07!63;UBERON:0001015!3.63e-07!63;UBERON:0000383!3.63e-07!63;UBERON:0002203!9.45e-07!6;UBERON:0001768!9.45e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.86e-53;3!UBERON:0001775;2.86e-53;3!UBERON:0000488;2.71e-40;4!UBERON:0002203;2.72e-27;6!UBERON:0001768;2.72e-27;6!UBERON:0002200;2.72e-27;6!UBERON:0007625;2.02e-15;11!UBERON:0006876;2.02e-15;11!UBERON:0001801;2.37e-12;14!UBERON:0000019;2.26e-09;19!UBERON:0000047;2.26e-09;19!UBERON:0004088;2.26e-09;19!UBERON:0010230;2.26e-09;19!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0001456;1.42e-08;21!UBERON:0003422;6.33e-08;6!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24!UBERON:0003104;5.70e-07;7!UBERON:0009142;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.87e-53,3;UBERON:0001775,2.87e-53,3;UBERON:0000488,2.71e-40,4;UBERON:0002203,2.72e-27,6;UBERON:0001768,2.72e-27,6;UBERON:0002200,2.72e-27,6;UBERON:0007625,2.02e-15,11;UBERON:0006876,2.02e-15,11;UBERON:0001801,2.37e-12,14;UBERON:0000019,5.93e-09,20;UBERON:0000047,5.93e-09,20;UBERON:0010312,5.93e-09,20;UBERON:0004088,5.93e-09,20;UBERON:0010230,5.93e-09,20;UBERON:0003072,5.93e-09,20;UBERON:0004128,5.93e-09,20;UBERON:0003071,5.93e-09,20;UBERON:0000970,1.42e-08,21;UBERON:0002104,1.42e-08,21;UBERON:0001456,3.15e-08,22;UBERON:0003422,6.34e-08,6;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24 | |||
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| ||
|short_description=p@chr4:169623845..169623853,+ | |||
}} | }} |
Latest revision as of 03:13, 30 July 2015
Short description: | p@chr4:169623845..169623853, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:169623845..169623853, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.87e-53 | 3 |
ciliated epithelial cell | 2.87e-53 | 3 |
multi-ciliated epithelial cell | 2.87e-53 | 3 |
non-pigmented ciliary epithelial cell | 2.87e-53 | 3 |
astrocyte of the cerebral cortex | 2.09e-14 | 3 |
neurecto-epithelial cell | 5.93e-09 | 20 |
mesenchymal stem cell of umbilical cord | 6.34e-08 | 6 |
oligodendrocyte | 6.39e-07 | 7 |
macroglial cell | 6.39e-07 | 7 |
astrocyte | 6.39e-07 | 7 |
oligodendrocyte precursor cell | 6.39e-07 | 7 |
columnar/cuboidal epithelial cell | 7.03e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.87e-53 | 3 |
ciliary body | 2.87e-53 | 3 |
atypical epithelium | 2.71e-40 | 4 |
vasculature of eye | 2.72e-27 | 6 |
uvea | 2.72e-27 | 6 |
vasculature of head | 2.72e-27 | 6 |
pigment epithelium of eye | 2.02e-15 | 11 |
vasculature of organ | 2.02e-15 | 11 |
anterior segment of eyeball | 2.37e-12 | 14 |
camera-type eye | 5.93e-09 | 20 |
simple eye | 5.93e-09 | 20 |
immature eye | 5.93e-09 | 20 |
ocular region | 5.93e-09 | 20 |
eyeball of camera-type eye | 5.93e-09 | 20 |
optic cup | 5.93e-09 | 20 |
optic vesicle | 5.93e-09 | 20 |
eye primordium | 5.93e-09 | 20 |
eye | 1.42e-08 | 21 |
visual system | 1.42e-08 | 21 |
face | 3.15e-08 | 22 |
mesenchyme of umbilical cord | 6.34e-08 | 6 |
sense organ | 1.27e-07 | 24 |
sensory system | 1.27e-07 | 24 |
entire sense organ system | 1.27e-07 | 24 |