FFCP PHASE1:Hg19::chr4:39344555..39344565,-: Difference between revisions
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|id=chr4:39344555..39344565,-
|short_description=p@chr4:39344555..39344565,-
|description=CAGE_peak_at_chr4:39344555..39344565,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:39344555..39344565,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr4:39344555..39344565,- | |||
|id=chr4:39344555..39344565,- | |||
|ontology_enrichment_celltype=CL:0000243!1.17e-16!15;CL:0000125!1.17e-16!15;CL:0000030!1.17e-16!15;CL:0000339!1.17e-16!15;CL:0000095!4.91e-15!17;CL:0000123!4.91e-15!17;CL:0002319!6.25e-11!25;CL:0000333!2.86e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000243;2.07e-24;15!CL:0000125;2.07e-24;15!CL:0000095;5.37e-22;17!CL:0002319;6.71e-16;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.07e-24,15;CL:0000125,2.07e-24,15;CL:0000030,2.07e-24,15;CL:0000339,2.07e-24,15;CL:0000095,5.37e-22,17;CL:0000123,5.37e-22,17;CL:0002319,6.71e-16,25;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.80e-37;10!UBERON:0003056;5.96e-34;3!CL:0000339;2.07e-24;15 | |||
|ontology_enrichment_disease=DOID:3093!4.59e-23!11;DOID:5409!1.03e-17!4;DOID:1325!9.89e-11!7;DOID:3904!9.89e-11!7;DOID:3905!1.21e-08!9 | |||
|ontology_enrichment_disease_v019=DOID:3093;5.98e-34;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,5.98e-34,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.60e-14!5;UBERON:0005388!1.60e-14!5;UBERON:0001802!1.60e-14!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0001016;8.24e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr4:39344555..39344565,- | |||
}} | }} |
Latest revision as of 05:02, 30 July 2015
Short description: | p@chr4:39344555..39344565, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:39344555..39344565, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.07e-24 | 15 |
glial cell | 2.07e-24 | 15 |
glioblast | 2.07e-24 | 15 |
glioblast (sensu Vertebrata) | 2.07e-24 | 15 |
neuron associated cell | 5.37e-22 | 17 |
neuron associated cell (sensu Vertebrata) | 5.37e-22 | 17 |
neural cell | 6.71e-16 | 25 |
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 5.98e-34 | 11 |