FFCP PHASE1:Hg19::chr4:69774211..69774248,+: Difference between revisions
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|id=chr4:69774211..69774248,+
|short_description=p@chr4:69774211..69774248,+
|description=CAGE_peak_at_chr4:69774211..69774248,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:69774211..69774248,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr4:69774211..69774248,+ | |||
|id=chr4:69774211..69774248,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.66e-12!12;CL:0000417!9.66e-12!12;CL:0000668!9.66e-12!12;CL:0000414!9.66e-12!12;CL:0000412!9.66e-12!12;CL:0000182!9.66e-12!12;CL:0002563!4.86e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.29e-23;4!CL:0002253;2.07e-12;2!CL:0002231;9.66e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.29e-23,4;CL:0002253,2.07e-12,2;CL:0002231,9.66e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.77e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.00e-12!3;UBERON:0004054!2.00e-12!3;UBERON:0009497!4.82e-12!25;UBERON:0000015!4.82e-12!25;UBERON:0002423!4.82e-12!25;UBERON:0006235!4.82e-12!25;UBERON:0004161!4.82e-12!25;UBERON:0003929!6.95e-12!54;UBERON:0005172!2.09e-11!55;UBERON:0005173!2.09e-11!55;UBERON:0002107!2.81e-11!19;UBERON:0006925!2.81e-11!19;UBERON:0008836!2.81e-11!19;UBERON:0002417!3.69e-10!61;UBERON:0000916!3.69e-10!61;UBERON:0001000!4.85e-10!1;UBERON:0005352!4.85e-10!1;UBERON:0001242!4.86e-10!4;UBERON:0001262!4.86e-10!4;UBERON:0004786!4.86e-10!4;UBERON:0004808!4.86e-10!4;UBERON:0001277!4.86e-10!4;UBERON:0001052!6.34e-10!4;UBERON:0001301!7.55e-10!1;UBERON:0008835!1.01e-09!22;UBERON:0003894!1.01e-09!22;UBERON:0005904!1.52e-09!4;UBERON:0009854!2.73e-09!23;UBERON:0005911!4.03e-09!82;UBERON:0007499!1.56e-08!25;UBERON:0003350!3.36e-08!5;UBERON:0005057!3.37e-08!26;UBERON:0009856!3.37e-08!26;UBERON:0004907!4.15e-08!5;UBERON:0000160!6.51e-08!27;UBERON:0004921!9.67e-08!129;UBERON:0004185!9.67e-08!129;UBERON:0001007!2.62e-07!155;UBERON:0001555!2.62e-07!155;UBERON:0007026!2.62e-07!155;UBERON:0002365!7.58e-07!31;UBERON:0002330!7.58e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.82e-31;17!UBERON:0005409;3.61e-24;22!UBERON:0001242;3.29e-23;4!UBERON:0001262;3.29e-23;4!UBERON:0004786;3.29e-23;4!UBERON:0004808;3.29e-23;4!UBERON:0001277;3.29e-23;4!UBERON:0001052;7.18e-23;4!UBERON:0002108;1.08e-18;4!UBERON:0004907;1.62e-18;5!UBERON:0004921;1.49e-15;33!UBERON:0000485;1.02e-13;7!UBERON:0003929;1.02e-13;7!UBERON:0003350;3.95e-12;8!UBERON:0000059;5.87e-09;11!UBERON:0002114;1.17e-08;2!UBERON:0001555;5.82e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.04e-31,17;UBERON:0001242,3.29e-23,4;UBERON:0001262,3.29e-23,4;UBERON:0004786,3.29e-23,4;UBERON:0004808,3.29e-23,4;UBERON:0001277,3.29e-23,4;UBERON:0001052,6.42e-23,4;UBERON:0005409,1.91e-21,25;UBERON:0002108,1.04e-18,4;UBERON:0004907,1.48e-18,5;UBERON:0003350,3.95e-12,8;UBERON:0001046,3.93e-11,19;UBERON:0000485,6.87e-11,9;UBERON:0004921,5.54e-09,118;UBERON:0000059,5.64e-09,11;UBERON:0002114,1.12e-08,2;UBERON:0001007,2.81e-07,145;UBERON:0001555,2.81e-07,145;UBERON:0007026,2.81e-07,145;UBERON:0003929,5.92e-07,54 | |||
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|short_description=p@chr4:69774211..69774248,+ | |||
}} | }} |
Latest revision as of 06:12, 30 July 2015
Short description: | p@chr4:69774211..69774248, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:69774211..69774248, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.29e-23 | 4 |
epithelial cell of large intestine | 2.07e-12 | 2 |
epithelial cell of prostate | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.04e-31 | 17 |
intestinal mucosa | 3.29e-23 | 4 |
wall of intestine | 3.29e-23 | 4 |
gastrointestinal system mucosa | 3.29e-23 | 4 |
gastrointestinal system epithelium | 3.29e-23 | 4 |
intestinal epithelium | 3.29e-23 | 4 |
rectum | 6.42e-23 | 4 |
gastrointestinal system | 1.91e-21 | 25 |
small intestine | 1.04e-18 | 4 |
lower digestive tract | 1.48e-18 | 5 |
epithelium of mucosa | 3.95e-12 | 8 |
hindgut | 3.93e-11 | 19 |
simple columnar epithelium | 6.87e-11 | 9 |
subdivision of digestive tract | 5.54e-09 | 118 |
large intestine | 5.64e-09 | 11 |
duodenum | 1.12e-08 | 2 |
digestive system | 2.81e-07 | 145 |
digestive tract | 2.81e-07 | 145 |
primitive gut | 2.81e-07 | 145 |
gut epithelium | 5.92e-07 | 54 |